Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03488 ATGACGATCTCATCATTATCACTCTCTAAGGTTGTAATAATGCTCATAGTTGTTTCTTTCAATCTCAATATTAGTATGAGTGCTGAGACCGTTTATGTGACCATGGTCAACAAACTGAACAATACGCAGCTTGTTATTCATTGCCACGATTATAATTGGGATTCAAAGCCCCAAGTAGCTCCAATTGGTCAAAGTTGGGCTTTTGATTTTCAATATAACCCTTCTTCAAATTATTTGTTCTTCTGTAGCTTTGCTTGGGTAGAGGGGGGAATATTCGAAGTACGTCGCTTTAATATTTATGAGACTGGACGTGACACTGATGTATGCCAAGACTGTGTTTGGAGCATCTCCGAAGACGGTCCATGTAGGATTTCGGGTGATCCGGGTACTGAATGTTATGAATGGGAACCGAAAAATGTATAA 423 0.3948 MTISSLSLSKVVIMLIVVSFNLNISMSAETVYVTMVNKLNNTQLVIHCHDYNWDSKPQVAPIGQSWAFDFQYNPSSNYLFFCSFAWVEGGIFEVRRFNIYETGRDTDVCQDCVWSISEDGPCRISGDPGTECYEWEPKNV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03488 140 Pfam Plant self-incompatibility protein S1 33 135 IPR010264 -
Aip05g03488 140 PANTHER - 22 135 IPR010264 -
Aip05g03488 140 SUPERFAMILY Cupredoxins 29 86 IPR008972 -
Aip05g03488 140 PANTHER S-PROTEIN HOMOLOG 18-RELATED 22 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03488 Aip-Chr5 141882674 141883131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03488 44 125 Carbohydrate Esterase AT3G16970 32.558 4.22e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03488 - - adu:107489894 220.705