Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03487 ATGACGCTCTCATCATCGTCACTCTCTAAGGTTGTAGTAACAATTTCCATGATAATGCTCATACTTGTTTCTTTCAATCTCAACGTTGCTGCTATTCCTTGGACCATTCGTGTGACCATGAACAACAAACTGAACAATATGCAGCTTGGTATTGAATGCAAGGATAAACACTGGGATTCAGGGTTCAAAGTAGTTCCAGTTGGTCAAAGTTGGAGTTTTTATTTCCATCCAAACCCTTTTTGGTTCAGATCATTGTTCTTCTGTACCTTTAATTGGTATGAGGGGGGAGGAGTACATCACTTTGATATTTATGATGCTAAACGTGATGTTAATGTATGCAAAGAATGTATTTGGGACATCTCCAAAACTGGTCCATGTAGGGTTTCGGGTTTTGCTGCTCCTATATGTTATCCCTGGAAAATGCCGCCACGGTTACCAGTCCCGTCGGACATCGCACCGACACTCTTCCGACTGGCACCGTCGTCCGCACAAGCCACCGTACGTAAAGAGGACGCGCATATTGTGCGAGTCGAGCTCGCAGCACCACAGCAACCAGGACGTCCAGCGCCTCCATCACAGCCGCGCTGGGATGATGTGAGCGCGGGGTTCGGGGTTGCAACTCACGTCGACGACACTGACAGTTGCAGGTTACAGATGTTCGGCCGTGTGAGAAGTGACGTAGGTTCTTCCAGTGAGAGCGTTGACGTAAGGAGGCGGAGCGCGACAGTTCCGTTCGGCAGGAACGGAAGCTACACGTCACGCAGAAACAAAGCGGTAGAACGCAGGTTGCTGCGTACACGATGGGACAGCGAAGAAAGGGGATTTTTCTGCGGAACAAACAATGGATTTTTTTGGAGGATAGGTAATGGTGGGTGA 876 0.4863 MTLSSSSLSKVVVTISMIMLILVSFNLNVAAIPWTIRVTMNNKLNNMQLGIECKDKHWDSGFKVVPVGQSWSFYFHPNPFWFRSLFFCTFNWYEGGGVHHFDIYDAKRDVNVCKECIWDISKTGPCRVSGFAAPICYPWKMPPRLPVPSDIAPTLFRLAPSSAQATVRKEDAHIVRVELAAPQQPGRPAPPSQPRWDDVSAGFGVATHVDDTDSCRLQMFGRVRSDVGSSSESVDVRRRSATVPFGRNGSYTSRRNKAVERRLLRTRWDSEERGFFCGTNNGFFWRIGNGG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03487 291 Pfam Plant self-incompatibility protein S1 38 139 IPR010264 -
Aip05g03487 291 PANTHER - 13 139 IPR010264 -
Aip05g03487 291 PANTHER S-PROTEIN HOMOLOG 18-RELATED 13 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03487 Aip-Chr5 141861500 141863017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03487 33 139 Carbohydrate Esterase AT3G16970 36.283 2.76e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03487 - - ahf:112803732 173.326