Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03486 ATGAGTGTTGATTCCATTCTCCCTCCTAAAGAAATAACAGTCACCATTAACAACAAACTGAACATGAAACTTGGTCTCCATTGCAAGGACAAGCATTCGGATTTTGGGTTCGTAGAACTTCAAGTTGGTGAGAGTTGGAGCTTCGAGTTTTATAACCCTTTTCGCATTTGGTTCTCGCCATTGTATTGGTGCATGTTTACATGGTATAATGGGCAAGAAGTAGTGCACTACTTTGATATTTATGTTGTCATGCTACGGATTGGAGAAGGAACCTGTCTTCCACTGTCTCTTGTCTTGTCCGAATGCCGGCGAGTTTTGGAAGGTGAATCAACTCCCATTCCCTCACCGTCGAGAAGAGCCATGGCGGTGGTGGCTCCAATTGATCGAATCATTTTAGAAAAGTGGAGGAACTCAGCGATCGAAGAGCTTTGGAGGAACAACAACACCATCTCATCTAATTTTCTTCCTTTTGATTGGTTGTAA 483 0.4286 MSVDSILPPKEITVTINNKLNMKLGLHCKDKHSDFGFVELQVGESWSFEFYNPFRIWFSPLYWCMFTWYNGQEVVHYFDIYVVMLRIGEGTCLPLSLVLSECRRVLEGESTPIPSPSRRAMAVVAPIDRIILEKWRNSAIEELWRNNNTISSNFLPFDWL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03486 160 PANTHER - 9 82 IPR010264 -
Aip05g03486 160 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 82 - -
Aip05g03486 160 Pfam Plant self-incompatibility protein S1 13 82 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03486 Aip-Chr5 141860036 141860986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03486 11 81 Carbohydrate Esterase AT3G16970 38.356 3.88e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03486 - K14437 adu:107489935 179.104