Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03485 atgaacaaggtggacacatggaagaaggctctgaaagaagtagctagtttgtctggTCATCATTTCAAGGATGGGCATCGATATGAACATGAGATTATTAAAAACATCGTAGAAGACATTTCAATAAAGATTGGACGTCTACCTTTGCCAGTGGCTGACTTCCCTGTTGGACTTGAGTTTCCAGTGTCAAAAGTAATTTCCCTTTTAGAAATGGATTCTACTGATCAAGTTCACATGGAAAGGATACATGGAATTGGTGGCATAGGAAAAATAACACTTGCTCTTGCTCTTTATAACTTGATTGCTGACAATTTTGAAGGTGTGTGTTTTCTTGAAAACTTGAGAGAAACTTCACAAAAATATGGTTTTGGAGAAGCAATGGCTAAGCTTGAGAACACATACAATAATGTTAGGAACAAGGCAGACAGATGGAAGAAGGCTTTGAAAGAAGTAGCTGGTTTGTCTGGTCATCATTTCAAAGACGGGCATCGATATGAACATGAGTTTATTAAAAACATCATGGAAGACATTTCAGGAAAGATTGTTCGGCTACCTTTGCCAGTGGCTAACTTCCCTGTTGGACTTGAGTTTCCAATGTCAAAAATAATTTCCCTTTTGGAAATGGATTCTACTGATCGAATTCACATGGTAGGGATACATGGAATTGGTGGAAAAGGAAAAATAAGCTCTTGCTCTTTATAA 702 0.3433 MNKVDTWKKALKEVASLSGHHFKDGHRYEHEIIKNIVEDISIKIGRLPLPVADFPVGLEFPVSKVISLLEMDSTDQVHMERIHGIGGIGKITLALALYNLIADNFEGVCFLENLRETSQKYGFGEAMAKLENTYNNVRNKADRWKKALKEVAGLSGHHFKDGHRYEHEFIKNIMEDISGKIVRLPLPVANFPVGLEFPMSKIISLLEMDSTDRIHMVGIHGIGGKGKISSCSL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03485 233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 122 IPR044974 GO:0006952
Aip05g03485 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 131 IPR027417 -
Aip05g03485 233 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 123 228 - -
Aip05g03485 233 Gene3D - 111 186 IPR035897 -
Aip05g03485 233 Gene3D - 1 49 IPR035897 -
Aip05g03485 233 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 6 122 - -
Aip05g03485 233 Coils Coil 127 147 - -
Aip05g03485 233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 123 228 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03485 Aip-Chr5 141853499 141855281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03485 7 114 WRKY Transcription Factor Family AT4G12020 33.636 2.67e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03485 - - aip:107641378 401.364