Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03474 ATGTTACCAAAAGTGTTGTGGAACTTGTATCGGATACATGATTTCGCAACCGATATTTTGAAACAACATGGGAGAACCGGTGAATTCATGGGACCTTGGTTCACCAACATGAACTATTTGGTCACTAGTGACCCCATGAATGTTCATCATATAATGAGCAAGAGTTTTGACAACTATGTCAAGGGCTCCGAATTCCGCGAGATTTTCCAAGTCTTTGGACTTGGAATTTTCACGGCGGATTCGGAGACCTGGAGGTACCATAGATCCTTGCTTCTCTCGTTGTTTAAGAATAGAAGATTCGAGATGTTTCTAGAGAAGACAATCAAGAAGAAGGTGGAATGTAGCTTAATTCCCACATTGGAAGATGTGAGACAACATGAGATTGAGGTGGATCTACAAGACATCTTCAATCGCTTCACATTCGACAACATTTGCAACATTGTTTTAGGGTATGATCCTAATTGTCTTTCTATTGAGTTCCCTCAAGTTGCATGTGAGAAGGCTTTTAATGAAGCTGAAGAGTCCTTATTCTATAGGCATGCTGTTCCAAAGAGTGTTTGGAAGCTTCTAGAATGGCTTCAATTAGGTCAAGAGAGAAAGATGAGTGAAGCTTGCAAGGTGTTTGACCAATTCATATACTCTTGCATAGCATCAAAGAGAGAAGAGATAAGCAAGTACAACAAAAGTAGTCAAATAGATGAAGCTCAAGTTGACTTGCTTAGTGCTTTGATGATGATGAGAGAACAAGAAGAACAAGAAAAGGGTCAAAGTCAAACATTATTAGTCAATGATGACAAGTTTTTAAGAGACTCAGCTTTTAATCTTTTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTTGCTACAAACCCATTAGTTGAAACCAAAATTCTTGATGAAATCAAAGAAAATTTTGGATCAAATAATGATGAAATGAAGCACAAAGTTTTAGGCATAGAAGAGGTGAAAAAGCTAGTTTATCTTCATGGTGCTCTTTGTGAATCTTTGAGGCTATTTCCTCCTATTCCTTTTGAGAGGAAACAACCAATCAAAAGTGACATACTCCCAAGTGGACATCATGTGAATCCAAATACAACGATCTTACTTTCTTTGTATGCAATGGGAAGATATGAAGAGATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAAAGGAGGAATAATTCATGTGCCTTCTTACAAGTTTATTAGTTTTAATGCGGGGCCAAGAACTTGCTTGGGAAAAGACTTGTCTTTTATGCAAATTAAGATGGTGGCAGCATCCATTTTGTGCAATTATCATATACATGTGGTGGAAGGTCATCAAGCTATCCCAAGTCATTCAATTGTGCTTCTAATGAAGGATGGTTTGAAGGTTAGGATAACCAAAAGAGAAGGCTTTTAA 1443 0.3798 MLPKVLWNLYRIHDFATDILKQHGRTGEFMGPWFTNMNYLVTSDPMNVHHIMSKSFDNYVKGSEFREIFQVFGLGIFTADSETWRYHRSLLLSLFKNRRFEMFLEKTIKKKVECSLIPTLEDVRQHEIEVDLQDIFNRFTFDNICNIVLGYDPNCLSIEFPQVACEKAFNEAEESLFYRHAVPKSVWKLLEWLQLGQERKMSEACKVFDQFIYSCIASKREEISKYNKSSQIDEAQVDLLSALMMMREQEEQEKGQSQTLLVNDDKFLRDSAFNLFVAGRDTITSALTWFFWLVATNPLVETKILDEIKENFGSNNDEMKHKVLGIEEVKKLVYLHGALCESLRLFPPIPFERKQPIKSDILPSGHHVNPNTTILLSLYAMGRYEEIWGKDCLEFKPERWISEKGGIIHVPSYKFISFNAGPRTCLGKDLSFMQIKMVAASILCNYHIHVVEGHQAIPSHSIVLLMKDGLKVRITKREGF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03474 480 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Aip05g03474 480 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PANTHER CYTOCHROME P450 1 476 - -
Aip05g03474 480 SUPERFAMILY Cytochrome P450 7 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 Gene3D Cytochrome P450 2 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 Pfam Cytochrome P450 19 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03474 480 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03474 Aip-Chr5 141702356 141703886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03474 1 480 Cytochrome P450 AT2G23180 48.333 2.98e-163 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03474 - - gmx:100781709 675.241