Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03470 ATGGCCATATTGTTTCTCATTATACCAATCCTCCTATTATTCTCATATCTTGTTCATCGCAGAAGAAGTTGTGAAACCCCTCTCTTGATAGATTGGCCAATCCTTGGCATGTTGCCACAAGTCCTTAGCAACTTGTGGCATATCCATGATTTTGTAACAAATGTTTTGAGACAAAAAGGTGGCACCGGTGAATTCATGGGGCCATGGTTCACCAAAATGAACTATATGGTCACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAAAGCTTTGACAACTATGTCAAGGGCCCAGAGTTTCGCGAGATCTTCCAAGCTTTTGGAGACGGTATTGTGACTGCAGATTCAGAGACATGGAGATACATTAGGACCATGCAACATTCCTTGTTCCGGCAACCGAGTTTTGAGACGATGGTGGAGAAAACCTTTCAAAAGAAGGTTCAGGATAGCTTGCTTCCGATACTTGATCATGCATGGTTACATGGAAATGTTTTGGATCTTCAAGATGTGTTTAGTCGATTAATGTTCGACGAGACATGCATCATGGTTTTAGGATATGATCCTAAGAGTCTCTCAATTGAATTTCCATTGGTGGAAATTGAGAAGGCTTTCGTTGAAGTTGGGGAGTCCATATTCTATAGGCACGTAGTGCCAAGAAGTGTTTGGAAGTTTCAAGAGTGGCTTCAAATTGGTGAGGAGAAGAAGATGACAAAAGCATGCAAAGTTTTTGACCGATTTCTATATTCATGCATTGCAACTAAGCGCCAAGAGTTAAATGAACGCAACAAAAGTAGTGGTGATGACTTGCTTAGTGCTATCATGATGATGGGTGAAGAAAAGGGCAAAATGGTCCATGATGATAAGTTTCTAAGAGATGCCGTATTCAATCTTTTTGTAGCCGGGAGAGATCCCATAACTTCGGCTCTTACATGGTTTTTTTGGCTCGTTGCAACACATCCATTAGTGGAGGCCAAGATTCTTGAAGAAATCGAAAAAGTTTTTGGCGCAAATGATGGGGAGAAACGCAAAGTTTTAGGGAAGGAAGATGTAAGGAAGCTAGTTTATCTGCATTGTGCTATATGTGAAAGTTTGAGACTATATCCACCTGTTCCTATTGAACGTAAGCAATCATTGAAATGTGACACACTTCCTAGTGGTCATCGTGTTAATCCAAATACAATTATTTTGTTTTTTACTTATGCAATGGGAAGGTTTGAAGATATTTGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAAGGAGGAACAATACGTGTTCCATCTTATAAGTTTTTTAGTTTTAATGCAGGTCCAAGGACATGCATGGGAAAAGACTTGTCTTTTATTCAAATGAAAATGGTGGCATCTGCTATTTTGCGCAATTATCATATACAAGTGGTGGAAAATCATCCTACTACCCCAGCTCATTCCACTGTCCTTTTTATGAAGCATGGCTTAAAGGTTATGATGACAAAAAGACAATTTTAA 1506 0.3951 MAILFLIIPILLLFSYLVHRRRSCETPLLIDWPILGMLPQVLSNLWHIHDFVTNVLRQKGGTGEFMGPWFTKMNYMVTSDPMNVHHIMSKSFDNYVKGPEFREIFQAFGDGIVTADSETWRYIRTMQHSLFRQPSFETMVEKTFQKKVQDSLLPILDHAWLHGNVLDLQDVFSRLMFDETCIMVLGYDPKSLSIEFPLVEIEKAFVEVGESIFYRHVVPRSVWKFQEWLQIGEEKKMTKACKVFDRFLYSCIATKRQELNERNKSSGDDLLSAIMMMGEEKGKMVHDDKFLRDAVFNLFVAGRDPITSALTWFFWLVATHPLVEAKILEEIEKVFGANDGEKRKVLGKEDVRKLVYLHCAICESLRLYPPVPIERKQSLKCDTLPSGHRVNPNTIILFFTYAMGRFEDIWGKDCLEFKPERWISEKGGTIRVPSYKFFSFNAGPRTCMGKDLSFIQMKMVASAILRNYHIQVVENHPTTPAHSTVLFMKHGLKVMMTKRQF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03470 501 Gene3D Cytochrome P450 15 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 499 - -
Aip05g03470 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Aip05g03470 501 SUPERFAMILY Cytochrome P450 16 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 Pfam Cytochrome P450 31 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03470 501 PANTHER CYTOCHROME P450 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03470 Aip-Chr5 141589341 141590846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03470 14 499 Cytochrome P450 AT1G47620 47.465 5.26e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03470 - - gmx:100780625 684.1