LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g03469	ATGGCCACATTGTTCCTCATTCTACCAATAATTCTCCTATTCCTACATGTTCTTCATCGCAGAAGATATTGTAGAACCCCTCTGTTGATAGATTGGCCAATCCTTGGCATGTTACGACAAATCCTTAGCGACTTGTGGCATATCCATGATTTTGCAACAAATGTTTTGAGACAAAAAGGAGGCACCGGTGAATTCATGGGGCCATGGTTCACCAAAGTGAACTATATGGTGACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAAAGCTTTGACAACTATGTCAAGGGCCCAGAGTTTCGCGAGATCTTCCAAGCTTTTGGAGACGGTATTGTGACTGCAGATTCAGAGTCATTGAGATACCTTAGGACCATGCATCATTTCTTGCTCCGGCAACAGAGTTTTGAGACGACGGTGGAGAAAACCTTTCAAGAGAAGGTTCAGAATAGCTTGCTTCCGATACTTGATCATGCATGGTTACACGGAAATGTTTTGGATCTTCAAGACGTGTTTAGTCGATTAATGTTCGACGAGACATGCATCATGGTTTTAGGATATGATCCTAAGAGTCTCTCAATTGAGTTTCCGTTGGTGGAAGTTGAGAAGGCTTTTGACGAAATTGAGGAGTCCATATTCTATAGACACATAGTGCCAAGAAGTGTTTGGAAGTTTCAAGAGTGGCTTCAAATTGGTGAGGAGAAGAAGATGACAAAAGCATGCAAAGTTTTTGACCGATTTCTATATTCATGCATTGCAACTAAGCGCCAAGAGTTAAATGAATGCAACAAAAGTAGTGGTGATGACTTGCTTAGTGCTATCATGATGATGGGTGAAGAAAAGGGCAAAATGGTCCATGATGATAAGTTTCTAAGAGATGCCGTATTCAATCTTTTTGTAGCCGGGAGAGATCCCATAACTTCGGCTCTTACATGGTTTTTTTGGCTCGTTGCAACACATCCATTAGTGGAGGCCAAGATTCTTGAAGAAATCGAAAAA	999	0.4134	MATLFLILPIILLFLHVLHRRRYCRTPLLIDWPILGMLRQILSDLWHIHDFATNVLRQKGGTGEFMGPWFTKVNYMVTSDPMNVHHIMSKSFDNYVKGPEFREIFQAFGDGIVTADSESLRYLRTMHHFLLRQQSFETTVEKTFQEKVQNSLLPILDHAWLHGNVLDLQDVFSRLMFDETCIMVLGYDPKSLSIEFPLVEVEKAFDEIEESIFYRHIVPRSVWKFQEWLQIGEEKKMTKACKVFDRFLYSCIATKRQELNECNKSSGDDLLSAIMMMGEEKGKMVHDDKFLRDAVFNLFVAGRDPITSALTWFFWLVATHPLVEAKILEEIEK	333

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g03469	333	Gene3D	Cytochrome P450	20	333	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip05g03469	333	Pfam	Cytochrome P450	31	332	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip05g03469	333	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	10	332	-	-
	Aip05g03469	333	SUPERFAMILY	Cytochrome P450	18	332	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip05g03469	333	PANTHER	CYTOCHROME P450	10	332	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g03469	Aip-Chr5	141583042	141584092	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip05g03469	31	332	Cytochrome P450	AT1G47620	44.337	1.29e-86	268

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g03469	-		-	aip:107641366	673.7

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