Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03463 ATGGAGTCACCTGCAAATGGAGTACTAGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTTGCACAGCAGCATGATCCTCCTTCTACATCCGGGACTCCCTGTCCTACGCGGCCTCCCTTAAGACCATCTCGGAATCATGTTCATGGGCCTTCTCCCATGCCCCATTCGGCCGGTCACCACCATAGTCACGGATCAAAGTCCATCATCCATCATCAAAATACCTATGTAGTTAATCAGAAGCATTCCTATTTGGAGGGTGAAAATGCGGACCATGAAGGATTGCCTTCGAAATCTTGCATCAAGCAATCATTTGATGATTCCAAGACTTGTGATTCAAGTGTCATATTCGAATCTGACATTGACAATTCCATCTCAGGTCCATCGAGACGAGCCGTTGGTAATCACAGCAGGAGTTACTGCCCATCAGAGGTTACTTTTTATGCAAGTCCTCAGAATAGTTGCTATGCTGCTACTGTCTATTCGGAAGCTAAACAAAGTTTCACCTATACTGAAATTAGTGAGTGTGGTACTAGTGTTGATAAGTCACTAGAAAGTGGCATTGAGGTTGCGAATTCCTGTGATTTTAATGAGAGTAGGAAGACCAGCATCTGCAGGGCGAGTACTGGGAGCGATATCAGCGATGAGAGCAGCACCAGTAGCTTGAGTAGTGCTATGTATAAACCACATAAGGCGAATGATAAACGGTGGGAAGCAATTCAGGCCATCCGAGCGCGCGATGGTATGTTGGAGATGAGACATTTCAGGTTGTTGAAGAAATTGGGACGCGGAGACATTGGAAGTGTGTATCTAGCTGAACTGAGCGGCACGAGGACTTCTTTTGCCATGAAAATAATGAACAAGACAGAGCTAGCGAATCGCAAGAAGCTTGTGAGGGCTCAGACTGAGAGAGAGATATTGCAGTCCTTAGATCATCCGTTTCTGCCCACATTGTATACACATTTTGAGACTGAGACATTCTCCTGCTTAGTAATGGAGTTCTGCCCCGGTGGAGACTTGCATGCACTCAGGCAAAGGCAACCCGGGAAGTATTTCTCGGAGCACGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTACATATGCTTGGGATCATCTACAGAGACCTTAAACCGGAGAACGTGTTGGTGAGGGAAGATGGTCATATAATGCTGTCGGATTTCGACCTCTCTCTAAGGTGCACGGTCAGTCCAACTCTTGTAAAGTCATCAAACTCTATCTTGGAGACGAAGACCTCAGGATACTGCATTCAGCCTTCTTGCGCCGAACCGACTTGTTCAATGCAGCCAGACTGCATCCAACCGGCATGCTTCTCGCCTCGATTTCTTTCCAGCAAATCCAAGAAAGGAAAGAAGTACAAGCCAAAGAATGACATGCATCATCAGGTGACCCCTCTTCCGGAGCTTATTGCCGAGCCAACAAATGCCAGATCGATGTCCTTCGTTGGTACACACGAGTACTTGGCTCCTGAGATCATTAAGGGCGAAGGGCACGGCAGTGCTGTGGACTGGTGGACATTTGGGATATTCCTATACGAGCTCTTGTTTGGGCGAACACCCTTCAAGGGCTCGGCCAATCGAGCAACGCTGTTTAACGTTGTTGGCCAGCCCTTAAGGTTTCCAGAGTCTCCAACTGTCAGTTTTGCTGCCAGGGACTTGATTAGGGGCTTACTCGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGTGGAGCCACCGAAATCAAACAGCATCCGTTCTTTCAGAATGTTAACTGGGCGCTGATCCGGTGCGCGAATCCTCCTGAGGTTCCACGACTCGTTAAACCAACCCCAGTTGAGATGGACCCTGGTTTGAACCCTTCTGGTAATTATTTAGACATTGATTTCTTTTGA 1908 0.4733 MESPANGVLESLSEVQNSVSVAQQHDPPSTSGTPCPTRPPLRPSRNHVHGPSPMPHSAGHHHSHGSKSIIHHQNTYVVNQKHSYLEGENADHEGLPSKSCIKQSFDDSKTCDSSVIFESDIDNSISGPSRRAVGNHSRSYCPSEVTFYASPQNSCYAATVYSEAKQSFTYTEISECGTSVDKSLESGIEVANSCDFNESRKTSICRASTGSDISDESSTSSLSSAMYKPHKANDKRWEAIQAIRARDGMLEMRHFRLLKKLGRGDIGSVYLAELSGTRTSFAMKIMNKTELANRKKLVRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNSILETKTSGYCIQPSCAEPTCSMQPDCIQPACFSPRFLSSKSKKGKKYKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRLVKPTPVEMDPGLNPSGNYLDIDFF 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03463 635 MobiDBLite consensus disorder prediction 1 67 - -
Aip05g03463 635 MobiDBLite consensus disorder prediction 9 31 - -
Aip05g03463 635 Gene3D Transferase(Phosphotransferase) domain 1 486 610 - -
Aip05g03463 635 PANTHER FLIPPASE KINASE 1-RELATED 94 635 - -
Aip05g03463 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Aip05g03463 635 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 94 635 - -
Aip05g03463 635 ProSiteProfiles Protein kinase domain profile. 255 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03463 635 SUPERFAMILY Protein kinase-like (PK-like) 234 615 IPR011009 -
Aip05g03463 635 CDD STKc_phototropin_like 253 614 - -
Aip05g03463 635 Gene3D Phosphorylase Kinase; domain 1 253 338 - -
Aip05g03463 635 SMART serkin_6 255 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03463 635 Pfam Protein kinase domain 489 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03463 635 Pfam Protein kinase domain 256 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03463 635 Gene3D Transferase(Phosphotransferase) domain 1 339 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03463 Aip-Chr5 141526483 141529929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03463 161 635 AGC Kinase Gene Family AT5G47750 70.000 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip05g03463 Pkinase 8.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03463 K08286 - gmx:100810909 993.416