Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03457 ATGTCAATGACTGGGTTGGAGGAATTGAAGAAAAAGCTTGTACCTTTGTTTGATGCTGAGAAGGGCTTCTCAACAAGCTCAACCTTGGACCCTTGTGATTCTTACACTTTATCCGATGGTGGGACCGTGAACTTGTTGAGCAGATCATATGGGGTGTACAATATCAATGAGCTTGGGTTGCAAAAGTGCACATCTCGATCTGTTCACGAGACTGCTGATCAGAGTGAGAAAACATATAGGTGTGCCTCCCACGAGATGCGAATATTCGGAGCAATTGGTAGTGGTGCCAGCAGTATTGTCCAGAGAGCTATTCATATACCAACACATAGGATTCTAGCTTTGAAGAAGATTAATATCTTTGAGAAGGAGAAAAGACAGCAGCTCCTAACAGAGATAAGGGCACTATGCGAAGCGCCTTGTTATCAGGGTCTTGTAGAGTTTCATGGGGCATTTTACACTCCGGACTCTGGACAAATAAGCATAGCTCTGGAGTATATGGATGGAGGATCGCTTGCAGATATCTTGCGAAAGCATAGAAGGATACCTGAACCTATTCTTTCATCCATGTTTCAGAAGCTCCTACATGGTCTAAGATATCTTCATGGAGTCAGATATTTAGTTCACAGAGACATAAAGCCTGCCAATTTACTCATAAACCTCAAGGGGGAGCCGAAAATTACTGACTTTGGTATCAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACGTACATGTCTCCTGAGAGAATCCGAAATGAAAGCTATTCTTATCCAGCCGATATTTGGAGCCTTGGTCTTGCTCTCCTCGAGTGTGGAACAGGAGAATTCCCATATACAGCTAATGAGGGTCCTGTAAATCTTATGCTGCAGATTTTGGATGATCCATCACCATCCCCGTCAAAACAAGTGTTTTCGCCCGAGTTCTGCTCTTTTGTTGATGCTTGCTTACAGAAGGATCCAGAAAGTAGGCCAACTGCAGAACAGCTTCTTTTGCACCCTTTTATTACAAAGTATGAGAATGCGGAGATAGATTTAGCGGCATTTGTTCGAAGTGTTTTTGATCCTACACAAAGATTAAAGGATTTGGCAGATATGTTGACATTACATTATTACTTACTATTTGATGGACCTGATGATTTGTGGCAACACACAAGGAGCTTGTATAATGAAAACTCAATTTTCAATTTCTCTGGGAAACAACATGTTGGTCCAAACAATATCTTCACAACCCTATCGAGTATTCGAAGTACGTTACTTGGCGATTGGCCTCCCGAGAAGTTGGTGCATGTCGTTGAAAAGCTTCAGTGTCGTGCTCACGGCGAAGATGGAGTCGCAATCAGGGTCTCAGGATCATTCATAATTGGGAATCAGTTTCTCATTTGTGGAGAGGGCATTCAAGTAGAAGGCTTACCAAACTTCAAGGATCTTGGAATTGATATTCCTAGCACGAGATTGGGTACATTTCATGAACAATTCATAGTGGAGGCAACAAACCTAATTGGATGCTACAACATTGTTAACCAAGAGTTGTATATTTGCCAATAA 1566 0.4208 MSMTGLEELKKKLVPLFDAEKGFSTSSTLDPCDSYTLSDGGTVNLLSRSYGVYNINELGLQKCTSRSVHETADQSEKTYRCASHEMRIFGAIGSGASSIVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRALCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRKHRRIPEPILSSMFQKLLHGLRYLHGVRYLVHRDIKPANLLINLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSKQVFSPEFCSFVDACLQKDPESRPTAEQLLLHPFITKYENAEIDLAAFVRSVFDPTQRLKDLADMLTLHYYLLFDGPDDLWQHTRSLYNENSIFNFSGKQHVGPNNIFTTLSSIRSTLLGDWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGEGIQVEGLPNFKDLGIDIPSTRLGTFHEQFIVEATNLIGCYNIVNQELYICQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03457 521 Pfam Protein kinase domain 90 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03457 521 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 4 520 - -
Aip05g03457 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Aip05g03457 521 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Aip05g03457 521 Gene3D - 367 519 - -
Aip05g03457 521 Gene3D Transferase(Phosphotransferase) domain 1 168 366 - -
Aip05g03457 521 Gene3D Phosphorylase Kinase; domain 1 53 167 - -
Aip05g03457 521 SUPERFAMILY NTF2-like 367 464 IPR032710 -
Aip05g03457 521 SUPERFAMILY Protein kinase-like (PK-like) 88 380 IPR011009 -
Aip05g03457 521 PANTHER - 4 520 - -
Aip05g03457 521 CDD PKc_MAPKK_plant_like 87 347 - -
Aip05g03457 521 ProSiteProfiles Nuclear transport factor 2 domain profile. 369 519 IPR018222 -
Aip05g03457 521 SMART serkin_6 86 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03457 521 ProSiteProfiles Protein kinase domain profile. 86 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03457 Aip-Chr5 141439737 141443843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03457 32 519 MAP Kinase Kinase Gene Family AT5G40440 77.869 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aip05g03457 Pkinase 4.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03457 K20607 - gmx:100784935 962.214