Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03456 ATGGCTTCATCATCTTCTTCTTCAAGCTACTCAAATTCTCCATGTGCGGCATGCAAGTTCTTGAGAAGAAAATGCTTACCGGATTGCATTTTCGCGCCCTATTTCCCGCCGGAAGAGCCACAAAAATTCGCAAACGTTCACAAGATCTTCGGCGCAAGCAATGTAAGCAAGCTTCTAAATGAAGTTCAGCCTCATCAAAGGGAAGACGCGGTGAATTCTCTTGCATATGAGGCTGAAGCAAGGATCAAGGATCCAGTTTATGGTTGTGTTGGTGCAATTTCAGTGCTCCAAAGACAAGTTATTAGGCTTCAAAAGGAGCTTGATGCCACAAATGCTGATTTGATGAGATATTGCAATGAAGTTCCTAACCCTACTTTAGGAAGAAGGAATAATAATAATAATAACAACAATAATAATAATTTGGGTGAAGGAGGTGGTGGTTCTTTTTATTACCCTTCTTCTTCTTCTTCAGCTTGGAACAATGATGATACTTGTGGTGGTGGGGATGGTTACCATAGAGGTTGA 525 0.4114 MASSSSSSSYSNSPCAACKFLRRKCLPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLMRYCNEVPNPTLGRRNNNNNNNNNNNLGEGGGGSFYYPSSSSSAWNNDDTCGGGDGYHRG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03456 174 MobiDBLite consensus disorder prediction 123 174 - -
Aip05g03456 174 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Aip05g03456 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 7 163 - -
Aip05g03456 174 Coils Coil 93 120 - -
Aip05g03456 174 MobiDBLite consensus disorder prediction 124 163 - -
Aip05g03456 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 163 - -
Aip05g03456 174 Pfam Lateral organ boundaries (LOB) domain 14 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03456 Aip-Chr5 141411767 141414033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03456 8 117 AS2 family AT3G27650 86.364 1.67e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip05g03456 LOB 2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03456 - - gmx:100788656 246.128