Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03443 ATGTCTCCTTGTTGTTCTTCTCTCTCTCACTTGATCTCTGCAAACCTCACAACAATGCATACCATTCCCATGATTTCACACTCCATAGCCATATCCAAGTTTCCTCACCCATTTTCTTCTTCCTCTTTACCACTCCGTCTCAGTTTCACCATTAATGGTGGAGGAGGAGGAGGACCCTTCTTATCATACCCATCACAAAAGTTACCTCCTTTCCCCATTTCAGCTCCAAAAATTCAATCTTTCAAGGTCCTTGCTGCTGCTTCTGTTCCTGAAGCTAAGAGTGATGAACCTATCAAACCAGCTGGTTTAATTCAAATCCTTCAGCTTGGAGCCATGTTCGGAACTTGGTACCTCTTGAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCATTGATGATTAACTTAATCTGGAGTCTTAATCTTCATCCCAGACCAAACATAACTCGTTCACAGCTTGTAGCAATTCTTCCACTGGTTGTGGCTCACACCATGGGGAATCTTCTAACCAACATTAGTCTTGGAAAGGTTGCTGTATCTTTCACACACACAATTAAAGCTATGGAGCCATTTTTCACTGTTGTTCTTTCCTCCCTCTTCCTTGGTGAGACGCCGACTTTTGCGGTAGTTTCTTCTCTTGTACCGATAGTAGGAGGAGTAGCACTGGCATCAATGACTGAAGTATCCTTCAATTGGATTGGCTTTGCTACTGCTATGGCATCTAACCTTACTAACCAGTCGCGGAACGTTTTGAGCAAAAAACTCATGGTCAATGAAGAGGAAACTTTGGACAATATCAACCTCTACTCTTTGATAACCATCATTTCCTTTATCCTTTTGGTTCCATTTACTATATTCTTGGAGGGTGTCAAGTTTACTCCGTCGTACCTGCAATCTGCTGCATGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATCGGTTTTGGCGGCGTTCTGCTTCCATGCATACCAGCAGGTATCTTATGGAATATTACAAATGGTGTCACCTGTGAGCCACTCAGTAGGGAACTGTGTGAAGCGCGTCGTTGTCATCGCCTCCTCGGTTATCTTCTTCCAAATTCCTCTCTCGCCACTCAACACGCTCGGAACTGGTGTTGCACTTCTTGGAGTTTTCTTGTATTCAAGGGTGAAGCAGATAAAGCCAAAGCCACAAACTAAGGCTGCATAA 1245 0.4305 MSPCCSSLSHLISANLTTMHTIPMISHSIAISKFPHPFSSSSLPLRLSFTINGGGGGGPFLSYPSQKLPPFPISAPKIQSFKVLAAASVPEAKSDEPIKPAGLIQILQLGAMFGTWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLMINLIWSLNLHPRPNITRSQLVAILPLVVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSSLFLGETPTFAVVSSLVPIVGGVALASMTEVSFNWIGFATAMASNLTNQSRNVLSKKLMVNEEETLDNINLYSLITIISFILLVPFTIFLEGVKFTPSYLQSAACQGLNVRELCVRSVLAAFCFHAYQQVSYGILQMVSPVSHSVGNCVKRVVVIASSVIFFQIPLSPLNTLGTGVALLGVFLYSRVKQIKPKPQTKAA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03443 414 Pfam Triose-phosphate Transporter family 107 400 IPR004853 -
Aip05g03443 414 PANTHER SOLUTE CARRIER FAMILY 35 71 406 - -
Aip05g03443 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 244 - -
Aip05g03443 414 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 71 406 - -
Aip05g03443 414 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 409 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03443 Aip-Chr5 141230294 141233811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03443 70 411 Antiporters AT5G33320 63.450 1.23e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03443 K15283 - gmx:100819280 567.77