Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03427 ATGGAGCATATATCAGAAAAACGATTTCCTCTCAATGCCAAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGTGTTAGTGCCTCAGTATACAGGGCGCTCTGCATTCCACTCAATGAGATAGTTGCCATCAAGGTTCTTGATCTCGAGAAGTGCAACAATGATTTGGATGGAATCCGGAGAGAGGTACAGACCATGAGCTTGATTGACCATCCGAATCTTTTACGAGCACATTGCTCTTTTACTGCTGGGCACAATCTTTGGGTTGTGATGCCATACATGGCTGGGGGTTCTTGCCTTCATATAATGAAATCTGCCTTTCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTACTTCGTGAAGTTCTCAAAGCACTAGTCTATCTTCATGACCATGGTCACATACACAGAGATGTTAAGGCTGGGAATATTTTGATTGATTCTAATGGTGCAGTCAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGATAGGCAACGATCAAGAAATACTTTTGTTGGAACACCCTGCTGGATGGCTCCTGAGGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAATATCCACCAATGAAAGTTTTGCTTATGACTTTGCAAAATGCCCCTCCCGGTCTTGATTATGAAAGAGATAAGAGATTTTCAAAGTCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTGAAAGACCCTAAGAAACGTCCAAGTTCAGATAAGCTTTTAAAGCACCACTTCTTCAAACATGCACGCCCTGTTGAATATCTTGCTCGCACAATTTTAGATGGCCTTGCTCCTTTGGGAGACCGCTTTAGAATGTTGAAGGCAAAAGAGGCAGATTTACTGGTTCAGAACAAGGCTCTTTATGAAGATAAGGAGCAATTGTCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAGGATTTAAAAAGTCAAGCTGCTCTCATTCAAGATGATGGAGTGCCAAATGCAGAAGACCCAGATATAGACAAGAAGCAAAAGGATAGATCTGATGACGAAAGGGTCCCAGCAGATGGTCTATCTTCTGTATCAGCTAATCATTCAGATGTTGCACCCACACTGGACAAAGAGGATGGCTTTAACAATCTTCAGGATTTGGAGAGTTCACTTCCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGTTGCTTTGATGTCGGTGAGGAAGATGTCAATAATACCAGTCCAAGAGATTTGGATACTGATTATGGAAGAAGTAACAATGAATCTTCTGGGCCAAGTGGTTCATTACCGCAAAATGCTATAGCTCAACAAAAAAAGTTTTTGAGTGGTTCTTTGCTGCCTGATAATTATCCTTCTTCCAAAAAGGTTTTCGATGGTGACAGGGATTATCTACAAACAAGGTATTCTTCTGAGCGGAATCATAGCGGTCCATTGTTATATCGGCAGAAGAGGGATAATACCAACCTTCCTTTGGTTGATGACACATCAGAAGGAGCTGTTGTTCAGCGTAAGGGGCGCTTTAAGGTCACATCAGCAGATCTCAGTCCAATGGGTCAGGCAAACTGCGTTTGTGTCCCAGTTAGTGGAGCTCCTGCTAGTCCGCCAAATCAGAACTCCGTGGCTGCTGCTATTCTTCCATCATTGCAGTGCATATTGCAACAGAACAGTTTGCAGAGGGAAGAACTTATTAAACTAATAAAGTATGCAGAGCAATCTTATGGCAAGAATGCAGAATCAGCGGAGGCAGTTGATTCTTTGCAGGCACCACCGGTGACAAATAGGGAGCGAGAGCTGTATTTTCAGGTTGTTCAACTCCAACAGAGTCTTGGCACCCTTGTTGAGGAATTGCAGAGACAAAAGATGAAAAACCTTCAGTTAGAGAAACAGTTGAGCTCAATGGCCAACAAAGTTGAAAAGTGA 2013 0.4203 MEHISEKRFPLNAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAFPEGFEEPVIATLLREVLKALVYLHDHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSDKLLKHHFFKHARPVEYLARTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDGVPNAEDPDIDKKQKDRSDDERVPADGLSSVSANHSDVAPTLDKEDGFNNLQDLESSLPSFPSKPLQALKGCFDVGEEDVNNTSPRDLDTDYGRSNNESSGPSGSLPQNAIAQQKKFLSGSLLPDNYPSSKKVFDGDRDYLQTRYSSERNHSGPLLYRQKRDNTNLPLVDDTSEGAVVQRKGRFKVTSADLSPMGQANCVCVPVSGAPASPPNQNSVAAAILPSLQCILQQNSLQREELIKLIKYAEQSYGKNAESAEAVDSLQAPPVTNRERELYFQVVQLQQSLGTLVEELQRQKMKNLQLEKQLSSMANKVEK 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03427 670 MobiDBLite consensus disorder prediction 359 378 - -
Aip05g03427 670 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 667 - -
Aip05g03427 670 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Aip05g03427 670 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
Aip05g03427 670 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 667 - -
Aip05g03427 670 Coils Coil 640 670 - -
Aip05g03427 670 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03427 670 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03427 670 Gene3D Transferase(Phosphotransferase) domain 1 97 295 - -
Aip05g03427 670 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Aip05g03427 670 MobiDBLite consensus disorder prediction 440 462 - -
Aip05g03427 670 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03427 670 CDD STKc_OSR1_SPAK 14 277 - -
Aip05g03427 670 MobiDBLite consensus disorder prediction 431 462 - -
Aip05g03427 670 MobiDBLite consensus disorder prediction 352 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03427 Aip-Chr5 140925790 140938174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03427 1 667 MAP Kinase Kinase Kinase Kinase AT5G14720 66.812 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aip05g03427 Pkinase 5.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03427 K08835 - gmx:100778837 1117.83