Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03424 ATGCCTGAAGGGATCATCACAAAAAAGAGGATACATTTCAGCAAACTATATTCATTTTCTTGTTTGAAATCTTCATTTGGAGATGGGCATTCCCAAATTGGTCAGAGAGGGTACTCAAGGATTGTGTATTGCAATGATCCTGATAACCCTGATGCAATTCAGCAGAATTATAGAGGGAACTATGTGTCAACCACAAAGTACACAGCTTTTAATTTCATCCCCAAGTCCCTTTTTGAACAGTTTAGGAGGGTTGCAAATATATATTTTCTTGTTGTTGCTTGTGTTTCATTTAGTCCATTGGCACCTTATACAGCTCTCAGTATTGTTGCACCATTGTTGCTTGTCATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAGCAGGATATAGAGGCAAACAACCGAAAGGTTCTGGTATATGGTAAAAATTATACATTTGTGGAGACTAGATGGAAAAAACTCCGAGTTGGTGATATTGTTAAGGTGTGTAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACGGAGACGGGGTTTGCTATGTCGAGACAATGAATCTCGATGGAGAAACTAATCTAAAGTTAAAGCACGCCTTGGATGCAACGTCTCATCTTCAAGATGAAAAACCTATCCAGAGGTTCAGGGCTATGGTTAAATGTGAGGATCCTAATGAAAACTTATACTCATTTATTGGAAACTTGCACTATGAGGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGACTCTAAGCTGAAGAACACTGATCATATCTTTGGTGTTGTAATCTTCACCGGCCACGATACAAAAGTGATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATTATATACATCCTCTTCAGTACCTTGATTTTCATATCCTTTATTGGTTCTGTCTATTTTGGTGTTGAGACTAAAAGGGATACCAGCGGTCGCAGGTATCGAAGATGGTATGTTCGTCCCGACAGTACAACGGTCTTTTATGATCCGAGAAGTGCTACACTTTCTGCTCTTCTCCACTTTTTAACTGCTCTTATGTTGTTTGGATATCTTATTCCTATATCACTTTATGTGTCCATAGAACTTGTGAAAGTTCTTCAGAGTGTTTTCATCAACCGAGATCAGGAAATGTATTATGAGGAAATGGATAGGCCGGCTCGTGCTCGCACCTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACTATATTATCTGACAAAACCGGTACTTTGACATGTAACTCGATGGAGTTTGTCAAATGTTCCATAGGAGGCATTCGATATGGCCGAGGTATGACAGAAGTGGAGAAGGCACTTGCAAGGAGAGGGAAAAATGTGGAGTCTCAAGTTGATGAAGCATCATGCGATTTTTCGGGCCAGGATAGTGACGTGGAGGACTCTCGGCCGCCAGTTAAGGGCTTTAACTTTAGAGATGAACGAATAATGAATGGGAAATGGGTTAATGAACCACAATCAGACATCATACAGAAGTTCTTTCGAGTTTTAGCTATTTGTCATACTGCTATTCCAGATGTAGATCAAGGGTCAGGAGAAATTTCTTATGAAGCTGAGTCACCAGATGAGGCGGCTTTTGTCATAGCTGCGAAGGAACTTGGTTTCGAGCTTTTCGCTAGGACACAAACAAGCATATCATTGCATGAATTAAACTACAAAACTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCCTAGAGTTCAGCAGTTCCCGCAAGAGAATGTCGGTGATAGTGAGGAATGAGGAAAATCAGTTGTTGCTCTTATGCAAGGGTGCAGACAGTGTAATGTTTGAAAGGCTGTCTGAAAAAGGAAGACAATATGAGGCCGAAACCAAAGAACATATCAAACAGTATGCCGAAGCAGGCTTAAGAACTCTGGTAATCACATACCGTGAACTTGATGAAGAAGAATATAAGTTATGGGAAGTAGAGTTTTCAAAGGCCAAAACATCTGTTGGAGCAGACCGAGATGCATTGGTCGATGCCGCTGCTGATAAGATGGAAAGAAATTTGATACTTCTTGGGTCTACAGCAGTTGAGGATAGACTGCAAAAGGGCGTTCCTGAATGTATTGAAAGGCTTGCTAAGGCAGGAATCAAGTTATGGGTGTTGACTGGGGACAAGATGGAAACAGCAGTCAATATAGGATATGCCTGCGGGTTACTTAGGCAAGACATGAAGCAGATAGTGATCACTCTTGATTCACCTAATATTATAGCACTTGAAAAGCAAGGGGATAAGGATGCTCTTAAAAAGGAATCTCTTGAAAGCATTAAGAAGCAAATTGGAGAGGGAATAAAGCAAATCAAGTTTGTGAAAGAGAGTACTAGTACAGATAAAGAGAGTTCTTCTTCATTCGGATTGATAATTGATGGGAAGTCTTTGGATTATTCGCTTAACAAGAACTTGGAGAATTCCTTCTTTGAGTTGGCAACTAGTTGTGCTTCCGTCATATGTTGCCGATCATCACCCAAACAGAAAGCTCGTGTTACAAAAATGGTAAAATTAGGAACTGGGCAGACAACATTATCCATCGGCGACGGGGCAAATGATGTCGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAATGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCCCAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTGCATGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGCTATTTCTTCTATAAAAATATTGCATTTGGATTCACCTTATTTTGGTTCGAGGCGTATGCTTCGTTCTCCGGCCAAGCTGCGTACAATGATTGGTACATGTCATTCTACAATGTCTTCTTCACTTCACTTCCAGTTATTGCTCTCGGTGTTTTCGATCAAGATGTTTCTGCTAAACTTTGCTTAAAGTATCCTTTTCTATATCTAGAGGGAGTAGAGGACACCCTCTTCAGCTGGCCGCGCATTATCGGCTGGATGGTTAACGGAGTCCTTAGCTCCTTAGCCATATTCTTCTTGACTGCAAACTCTGTCATGACTCAGGCCTTCAGAAGGGATGGTCAAGTGGTCGATTTCGAGATACTCGGCGTCACGATGTACACGTGTGTAGTGTGGACCGTGAATTGCCAAATGGCGCTTTCCATCAATTACTTCACTTGGATCCAGCATTTTTTCATCTGGGGCAGCATTGCATTCTGGTACGTATTCGTGCTGGTTTACGGCTACCTCTCGCCGGAAATATCGACGACGGCTCACATGGTGTTTGTGGAAGCTTGTGCTCCAAGTTTGCTATATTGGCTAGTTACCCTTTTGGTGGTTGTGTGTGCTCTTCTACCTTATTTTTGCTATAGATCATTCCAAAGTAGGTTTCTACCAATGTATCATGATATTATTCAGAGAAAACAAGTTGAAGGTTCTGATATTGAGATATGTGATGAGGTTCCTAAACAAGTCCATGGAAAACTAATACATCTAAGAGAGAGATTGAAGCAAAGGGAACTATGA 3618 0.4063 MPEGIITKKRIHFSKLYSFSCLKSSFGDGHSQIGQRGYSRIVYCNDPDNPDAIQQNYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIVAPLLLVIGATMAKEAVEDWRRRKQDIEANNRKVLVYGKNYTFVETRWKKLRVGDIVKVCKXXXXXXXXXXXXXXXXXXXXXXXXYGDGVCYVETMNLDGETNLKLKHALDATSHLQDEKPIQRFRAMVKCEDPNENLYSFIGNLHYEGKEYPLSLQQILLRDSKLKNTDHIFGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLIFISFIGSVYFGVETKRDTSGRRYRRWYVRPDSTTVFYDPRSATLSALLHFLTALMLFGYLIPISLYVSIELVKVLQSVFINRDQEMYYEEMDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIRYGRGMTEVEKALARRGKNVESQVDEASCDFSGQDSDVEDSRPPVKGFNFRDERIMNGKWVNEPQSDIIQKFFRVLAICHTAIPDVDQGSGEISYEAESPDEAAFVIAAKELGFELFARTQTSISLHELNYKTGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERLSEKGRQYEAETKEHIKQYAEAGLRTLVITYRELDEEEYKLWEVEFSKAKTSVGADRDALVDAAADKMERNLILLGSTAVEDRLQKGVPECIERLAKAGIKLWVLTGDKMETAVNIGYACGLLRQDMKQIVITLDSPNIIALEKQGDKDALKKESLESIKKQIGEGIKQIKFVKESTSTDKESSSSFGLIIDGKSLDYSLNKNLENSFFELATSCASVICCRSSPKQKARVTKMVKLGTGQTTLSIGDGANDVGMLQEADIGVGINGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRIIGWMVNGVLSSLAIFFLTANSVMTQAFRRDGQVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPEISTTAHMVFVEACAPSLLYWLVTLLVVVCALLPYFCYRSFQSRFLPMYHDIIQRKQVEGSDIEICDEVPKQVHGKLIHLRERLKQREL 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03424 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 443 677 IPR023299 GO:0000166
Aip05g03424 1205 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 7 1188 - -
Aip05g03424 1205 Coils Coil 118 138 - -
Aip05g03424 1205 Gene3D - 113 299 - -
Aip05g03424 1205 SUPERFAMILY Calcium ATPase, transduction domain A 196 296 IPR008250 -
Aip05g03424 1205 SFLD p-type atpase 420 936 IPR044492 -
Aip05g03424 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1188 - -
Aip05g03424 1205 Pfam Cation transport ATPase (P-type) 555 640 - -
Aip05g03424 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1162 IPR023298 -
Aip05g03424 1205 Pfam Phospholipid-translocating ATPase N-terminal 42 105 IPR032631 -
Aip05g03424 1205 CDD P-type_ATPase_APLT_Dnf-like 59 1045 - -
Aip05g03424 1205 SUPERFAMILY HAD-like 431 940 IPR036412 -
Aip05g03424 1205 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1171 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip05g03424 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 913 1163 IPR032630 -
Aip05g03424 1205 Gene3D - 713 925 IPR023214 -
Aip05g03424 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 856 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g03424 1205 SFLD C1.7: P-type atpase like 420 936 - -
Aip05g03424 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Aip05g03424 1205 Gene3D - 558 712 IPR023299 GO:0000166
Aip05g03424 1205 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Aip05g03424 1205 PRINTS P-type cation-transporting ATPase superfamily signature 885 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03424 Aip-Chr5 140873396 140880085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03424 11 1204 Primary Pumps ATPases AT1G68710 61.143 0.0 1555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03424 K01530 - gmx:100817020 2034.22