Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03418 ATGTTGGAAGGTGGTGCTAAATTCCCTGGATTAATAGATCTCAACAAGCATACAACTGACAACTATTATGATTTCTCTCAAGGCTTTTACCATAAGCTTGGGGAGGGTACTAATATGTCGATTGACAGCATGCAAACAAGTAATGGTGGGGGATCTGTTGCGATGTCCATAGATAATAGTAGTGTTGGGTCTAATGATTCCCATACTCGCATATTGAACCACCAAGGGTTGCGGCGGCGTGCAAATGATAACTACTCTGTTCAAAACAGTGTAAATCGTCGAGGAAGAGTCACACATGCACTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGATAGCAATTCTCCTACTGAGGGACTTGAAAATTTTGACGAGTGGACAATTGATTTAAGGAAGCTTAATATGGGCGAGGCCTTTGCTCAAGGAGCTTTTGGGAAACTCTACAGGGGTACTTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAAAGGCCTGAAAATGATTTATCAAAGGCTCAAAAACCGATGGTATGGTGCATCGTAACGGAATATGCCAAAGGGGGTTCCGTTAGACAGTCTTTAATGAAACGTCAGAATCGATCAGTTCCCCTAAAATTGGCCGTCAAACAGGCTTTGGATGTTGCTAGAGGAATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTTTGATTTTTGGGGATAAATCAATTAAAATTGCTGACTTCGGTGTTGCTCGGATTGAGGTGCAAACGGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACACAAAAGGTGGATGTGTATAGCTTTGGGATTGTTCTTTGGGAGCTTATCACCGGAATGCTTCCATTTCAGAACATGACAGCAGTGCAGGCTGCATTTGCAGTTGTGAACAAAAATGTTCGCCCGATCATACCCAACGATTGTTTACCTGTTCTCCGTGACATTATGACAAGATGCTGGGATCCCAACCCTGATGTCCGCCCGCCATTTGCCGAAATTGTAGGAATGCTCGAGAATGCAGAGACTGAGATCATGACAACTGTTCGGAAAGCCCGATTTAGGTGTTGCATGACACAACCAATGACTGCTGACTGA 1158 0.4396 MLEGGAKFPGLIDLNKHTTDNYYDFSQGFYHKLGEGTNMSIDSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVQNSVNRRGRVTHALSDDALAQALMDSNSPTEGLENFDEWTIDLRKLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPENDLSKAQKPMVWCIVTEYAKGGSVRQSLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIIPNDCLPVLRDIMTRCWDPNPDVRPPFAEIVGMLENAETEIMTTVRKARFRCCMTQPMTAD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03418 385 SMART serkin_6 133 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03418 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Aip05g03418 385 SUPERFAMILY Protein kinase-like (PK-like) 116 358 IPR011009 -
Aip05g03418 385 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 173 - -
Aip05g03418 385 PRINTS Tyrosine kinase catalytic domain signature 182 195 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 PRINTS Tyrosine kinase catalytic domain signature 266 276 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 PRINTS Tyrosine kinase catalytic domain signature 220 238 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 PRINTS Tyrosine kinase catalytic domain signature 329 351 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 Pfam Protein tyrosine and serine/threonine kinase 178 357 IPR001245 GO:0004672|GO:0006468
Aip05g03418 385 PANTHER SERINE-THREONINE PROTEIN KINASE 2 173 - -
Aip05g03418 385 Gene3D Transferase(Phosphotransferase) domain 1 187 381 - -
Aip05g03418 385 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 173 376 - -
Aip05g03418 385 ProSiteProfiles Protein kinase domain profile. 133 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03418 385 CDD STKc_MAP3K-like 140 358 - -
Aip05g03418 385 PANTHER SERINE-THREONINE PROTEIN KINASE 173 376 - -
Aip05g03418 385 Gene3D Phosphorylase Kinase; domain 1 124 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03418 Aip-Chr5 140791148 140808241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03418 1 385 MAP Kinase Kinase Kinase AT2G24360 72.289 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip05g03418 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03418 - - gmx:100788536 719.924