Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03411 ATGCTGAAAGTTAATGTAGATGCAGCAGTTGGTAATATTAATAAGGGAGGTGTAGGAGTTGTTATTAGAGATAACTTGGGCCAAGTCATGGCAACAACTTGTTGGGCTATTCCCTTCCCCCTTAAGGCCCATGAGACAGAAGTATATGCTGCTTATCGAGGAATGAAGATGGCTATAGAAAGTTGTTTTACAAACATCATTTTGGAGAGTGATAGTATGCAAGTGGTGAAAGCTCTCAAACAAGGAAAGATAAATGATTCTTGTTTTGGTTCCTTCATTGCTGATAGTCTATATTTAATAGAGGACAAACACTGCGATGCCGCATCTCCAACTTCTTCCACCACCACCGACTCATCTGCATCTGAGCCTACATCAACGTGCCACTGTGCCGGAACTCTGAAGCGCAAGGCCAGCCCCCTCTCACTATGGCGCGTCAAATCTGCCACTCGAAGCACGTTTTGGGCGTGGACTCAGTGCTGCTGGCTGAGGAGATATGAGAGAAGAGCTAGCGAAACAGAGAGATTCAGAGAGGAGAGAGAGCTCGCCTCGCCGTCATTGTTGCTGTCGCCACCGCAGTTCATCGCCTATCCATATCTGGTCGCAATGCCCAAGCCTCTGAGGATGTTCCATTACGACCTTCTCGACGAGATGCAGAATAAGCTCGATTACATCCTCTCTCTCACCGTTGAGAACTTCCTCGAGCGCTGCCTTCATATTTTCGTCTTCAAGTTCGGCATGGCCAAGTCCATCCATTAA 756 0.4722 MLKVNVDAAVGNINKGGVGVVIRDNLGQVMATTCWAIPFPLKAHETEVYAAYRGMKMAIESCFTNIILESDSMQVVKALKQGKINDSCFGSFIADSLYLIEDKHCDAASPTSSTTTDSSASEPTSTCHCAGTLKRKASPLSLWRVKSATRSTFWAWTQCCWLRRYERRASETERFREERELASPSLLLSPPQFIAYPYLVAMPKPLRMFHYDLLDEMQNKLDYILSLTVENFLERCLHIFVFKFGMAKSIH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03411 251 Gene3D - 1 109 IPR036397 GO:0003676
Aip05g03411 251 Pfam Reverse transcriptase-like 5 87 IPR002156 GO:0003676|GO:0004523
Aip05g03411 251 PANTHER BNAC02G40300D PROTEIN 2 99 - -
Aip05g03411 251 SUPERFAMILY Ribonuclease H-like 2 81 IPR012337 -
Aip05g03411 251 PANTHER - 2 99 - -
Aip05g03411 251 CDD RNase_H_like 4 82 IPR044730 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03411 Aip-Chr5 140621463 140625137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03411 207 251 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 75.556 4.88e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03411 K02997 - aip:107641340 193.356