Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03397 ATGACGATGATGAATCATGGAAAGCGTGTTGTTGCTGTGGCAATTGAGAATAATAAGACAAGCCAAAGTGCTGCAAAATGGGCAGTGGATAATATTCTTCCAAAGGATCAAGATCTCTTACTCATCCATGTTAAGCAAAGATCATCATCAGATAATAGTCGTTCACCATGTACGGATAGACCACATGACAAAGAATCAAAGGAGCTGTTTGAGTCGTTTCGAGTGTTTTGCAACAGAAAGAATGTACACTTCAAAGAAATTTTGTTAGAGGACACAGATATATCAAAGGCATTAGTAGAAAGTGTTACCACATATTCCATTGAGCTTTTAGTACTTGGGGCAGCATCAAGGAGTGGTCTTGCTAGATTTAGGATGAGTGATGTTCCAAGCACGGTGTCAAAAGCGGTACCGTCATTCTGCACCGTCTATATAATCTCCAAAGGAAAGATCTCATCCGTTAAAACTGCGACCGTATTACTCTCTCCAAAACCTGCGTCGCAGAATAAGATCCACTCTTCTCTGGCTCAACGTGCTGAGCGACCACGCAACCTCACACTCCCACGACATGCCGGATCATTTCCAGACAAACGCGCATATGCACGCCGTAATCGCGGCAGTGATGAAGCCATATCACCATACGAGACAAAAAGAAGAAACTACGCATCAAATAATGTACCTGAAGATTGTGACATATCATTTGTGGCGAGTGCAAAACCAAGTGTTGATAGGCTCTTCCCTTCGTTGTATTCCGATGATGATTTTGATGGAACCAGATCAAGATCAAGATCCCCCCAAGAATCAGGACAGAAATCTTTCATGTGTGATGACTACTCATTCACCTCTCTATTATCGCCAACAGAGAACGAAGAAATGGAAGCTGAGGTGAGAAAGCTAAAGCTAGAACTGAAGCAGACAATGGAGATGTATAGCTCAGCTCGCAAGGAAGCTCTAACAGCAAAGGAGAAGGCAATGGAGCTTCAACGGTGGAAAAAGGAAGAAAAGAGGAAGATGGAAGACTTACAAATATCGGAAGGAGCGGCATTGGCTAGTCCAGGGGGGGAGAAAGAAAAGGATCAAAGGATCGCAGAGTCTGAAGCACAGAAAAAAATTAGTCCAGAGAAAACATCTCCGCGAGAAGCACCACAGATGAAGAGAGGACTAGAACCTCGAGGTGTTGGTACTGCCATGTACCGAAGGTACTCCATTGAGGAAATCGAGGAAGCGACACAAAAGTTCTCAGCAGCTTTCAAGATCGGTGAAGGAGGCTATGGCCCTGTATACAAGGGTGAATTAGATCACACACCGGTTGCAATAAAAGTTTTGAGGCCAGATGCAACTCATGGAAGGGAACAATTTAATCAAGAGGTTGAAGTGTTAACTTGTATAAGGCATCCAAACATGGTTCTCCTCCTCGGAGCATGCCCAGAGTATGGTTGCTTAGTGTATGAGTACATGGCTAATGGGAGCTTGGACGATTGCCTCCTCCGACGAGGGAAGTTACCGGCTCTTCCTTGGCAGCTAAGGTTCCAAATTGCTGCAGAGATAGCCACAGGCCTCCTATTCCTTCACCAGACAAAGCCAGAGCCCATTGTACACCGCGACTTGAAGCCAGGAAACATTTTGCTAGACCGGAATTTCGTGAGCAAGATCAGTGATGTTGGGCTAGCCAGGCTTGTCCCTCCTTCAGTTGCAGACGCCGTCACTCAGTATCGTTTGACATCAACAGCCGGAACATTCTGTTACATTGACCCTGAGTACCAACAGACTGGCATGCTTGGAATCAAGTCTGATATTTACTCACTTGGGATCATGCTTCTCCAAATTGTGACAGCTAGGTCACCAATGGGTTTGGCTCATCATGTTAAGAGGGCCATCGCCAAAGGGACTTTGGAAGAGGTGCTTGATCCAGCTATTTCTGACTGGCCAATGGACCACACCTTGCATTTCACCAAACTCGCCTTGAAATGCGCCGAAATGATGAGAAAAGATAGACCTGATCTTGGGAAAGTTGTCTTACCGGAGCTCAATAAACTTAGGACATTTGCTGAAGAAAACATGCCTCCTATGATGATGTTTGGAAGAGCCTTCTCTCCGAGACCACAACAATGA 2109 0.4523 MTMMNHGKRVVAVAIENNKTSQSAAKWAVDNILPKDQDLLLIHVKQRSSSDNSRSPCTDRPHDKESKELFESFRVFCNRKNVHFKEILLEDTDISKALVESVTTYSIELLVLGAASRSGLARFRMSDVPSTVSKAVPSFCTVYIISKGKISSVKTATVLLSPKPASQNKIHSSLAQRAERPRNLTLPRHAGSFPDKRAYARRNRGSDEAISPYETKRRNYASNNVPEDCDISFVASAKPSVDRLFPSLYSDDDFDGTRSRSRSPQESGQKSFMCDDYSFTSLLSPTENEEMEAEVRKLKLELKQTMEMYSSARKEALTAKEKAMELQRWKKEEKRKMEDLQISEGAALASPGGEKEKDQRIAESEAQKKISPEKTSPREAPQMKRGLEPRGVGTAMYRRYSIEEIEEATQKFSAAFKIGEGGYGPVYKGELDHTPVAIKVLRPDATHGREQFNQEVEVLTCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLLRRGKLPALPWQLRFQIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADAVTQYRLTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTARSPMGLAHHVKRAIAKGTLEEVLDPAISDWPMDHTLHFTKLALKCAEMMRKDRPDLGKVVLPELNKLRTFAEENMPPMMMFGRAFSPRPQQ 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03397 702 Pfam Universal stress protein family 9 137 IPR006016 -
Aip05g03397 702 Gene3D Phosphorylase Kinase; domain 1 387 484 - -
Aip05g03397 702 MobiDBLite consensus disorder prediction 252 272 - -
Aip05g03397 702 Gene3D HUPs 8 145 IPR014729 -
Aip05g03397 702 Coils Coil 288 315 - -
Aip05g03397 702 MobiDBLite consensus disorder prediction 194 214 - -
Aip05g03397 702 Pfam Protein kinase domain 417 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03397 702 PANTHER OS02G0152300 PROTEIN 7 700 - -
Aip05g03397 702 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 144 - -
Aip05g03397 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Aip05g03397 702 CDD STK_N 10 148 - -
Aip05g03397 702 MobiDBLite consensus disorder prediction 333 386 - -
Aip05g03397 702 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 700 - -
Aip05g03397 702 MobiDBLite consensus disorder prediction 351 385 - -
Aip05g03397 702 ProSiteProfiles Protein kinase domain profile. 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03397 702 SUPERFAMILY Protein kinase-like (PK-like) 393 671 IPR011009 -
Aip05g03397 702 Gene3D Transferase(Phosphotransferase) domain 1 485 688 - -
Aip05g03397 702 MobiDBLite consensus disorder prediction 169 221 - -
Aip05g03397 702 SMART serkin_6 412 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03397 Aip-Chr5 140278273 140283275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03397 11 686 Receptor kinase-like Gene Family AT5G35380 52.925 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip05g03397 Pkinase 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03397 - - gmx:100803837 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03397 05 140278273 140283275 Aip05g03397 05 140278273 140283275 ECH