Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03390 ATGTCTCTTTTTGGATACTTGGGTCTCAAGGTATCAAAGCCAAAAACCTATGTTAAGCCTAAGAACTTCGACCTGTTTTATACTTCTGTCTCTGCTTCTACTGTCTCAAGTATGACGGCCATAGAAATGGAAGTTTTCTCTAACTCCCAACTCGTCCTCATAACTTTTCTTATGTTTTTTGGTGGTGAAGTTTTCACTTCCTTACTAGAACTTGTCTTTGCTAGGTTCAATAACAATTCATTCACTTCCATGAAAAATGATTATAGTGTCAAAGTTAGTACTAATAATAGTCTTCCAATAAAAAAAGTCCATGATCAAATTGAGCTTGGTTTAGTTTCTATTCCTAATCATCACTCATCACAAGACCAAAACCAATTCATTCATGTCAATTATGATATTAACAATAAACATGTACTTAGGTCTAACTCCCTTAAGTATTTGAGCCATGTAGTTTTAGGTTACTTTTTGGTGCTTCAATTTGTTGGAACTTTCTTGGTTTCTATGTACATGAGCTTCATTCCTAGTGCAAAGCAAGTACTTAGAGAAAAAGGTATCAAAACCCTAACATTTTCTATTTTCACCATAGTTTCAACTTTTGCAAGTTGTGGCTATGTCCCCACAAATGAAAATATGATAGTTTTCAAGAAGAATTCAGGCCTTCTTATTATTATTCTCCCATATATCCTTCTTGGTAACACCTTGTATGCACCATGCTTGAGGTTTGTGATTTGGGTTCTTGAGAAAATTACCAAAAGAGAGGAATTTTCATACTTGCTTAAGAATTCAAAGGAAATAGGTTTTGGTCATTTGCTACCTCCCCTTCATTCTTGGCTACTTGTTGCTACCGTTTTAGGGTTCAATATAATTCAATTTGTGATTTTTTGTTCCATGGAGTGGGGAACACAAATCATGGATGGTTTGAATCCTTATCAGAAATTTGTTGCGTCTTTGTTTCAAATCACAAATGCTAGACATTCCGGTGAATCCGTTTTTGATCTCTCTACCATCTCTTCAGCCATATTGGTCCTCTTCGTCGTCATGATGTACCTTCCACCATACACAACATTCTTGCCCATAATGGACCACGAGACCGAAAATGATGCCAAGAAAGACAAAAGAAGGCTAGTGGAGTGCCTTGTGTTGTCTCAACTTTCATATTTGGTTATTTTCATTATTTTGATTTGCATCACTGAGAACAAAAGCCTGAGAGAGGATCCTCTCAACTTTAATGTTTTGAACATCACCATAGAAGTCATCAGGCATGCCACTTTCATTTCTTTTCTCTCTTCGCTTATATATGTATTCTTTCTCAACTATTAA 1320 0.3576 MSLFGYLGLKVSKPKTYVKPKNFDLFYTSVSASTVSSMTAIEMEVFSNSQLVLITFLMFFGGEVFTSLLELVFARFNNNSFTSMKNDYSVKVSTNNSLPIKKVHDQIELGLVSIPNHHSSQDQNQFIHVNYDINNKHVLRSNSLKYLSHVVLGYFLVLQFVGTFLVSMYMSFIPSAKQVLREKGIKTLTFSIFTIVSTFASCGYVPTNENMIVFKKNSGLLIIILPYILLGNTLYAPCLRFVIWVLEKITKREEFSYLLKNSKEIGFGHLLPPLHSWLLVATVLGFNIIQFVIFCSMEWGTQIMDGLNPYQKFVASLFQITNARHSGESVFDLSTISSAILVLFVVMMYLPPYTTFLPIMDHETENDAKKDKRRLVECLVLSQLSYLVIFIILICITENKSLREDPLNFNVLNITIEVIRHATFISFLSSLIYVFFLNY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03390 439 Pfam Cation transport protein 142 350 IPR003445 GO:0006812|GO:0008324|GO:0055085
Aip05g03390 439 PANTHER SODIUM TRANSPORTER HKT1 1 419 - -
Aip05g03390 439 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03390 Aip-Chr5 140158301 140159739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03390 10 419 Inorganic Solute Cotransporters AT4G10310 47.156 4.53e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03390 K24976 - gmx:100800875 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03390 05 140158301 140159739 Aip05g03390 05 140158301 140159739 ECH