Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03388 ATGATGAACTTTTCCTTGTTTGGTAGAAAGCTACAACATCTTTGTAGTAGCCCTTATTTTCATCTCAACTTCAGCTCATTTTTCATTCAACTTTGTTATTTCATGATCCTTTCTCTTTTTGGTTACTTGGGTCTCAAGATATCAAAGACAAGAACTCATATTAAGCCCAATGATTTTGACCTTTTTTATACTTCTGTTTCTACCTCTACTGTGTCTAGCATGACGGCGGTAGAAATGGAAGTTTTCTCTAACTCTCAACTCATTCTCATGACCTTTCTTATGTTTGTTGGTGGTGAGGTTTTCACTTCCTTATTAGAACTTATTTTTGCTAGGTTCAGTAATAATAACAATTATAATAATTCATCCACTTCTATGAAAAATAGTCTTCCAATAAAAGTGGTCAATGATCAAATTGAGCTTGGCTTAGTTTCTATTCCTAATCATCACTCATCACAAGACCATAAACAAGTCAATGATGTCAATGGTATCAATAATAATAATAACAATGTTCCAAGTGGCACAACAATAGTCTCCTATAATAACAATAAAGATATGCTACTTAGGTCTAACTCCCTTAAGTATTTGAGTCATGTAGTTTTAGGTTACTTTTTGTTGCTTCAATTTGTTGGAACTTTCTTGGTTTCTATGTACATGAGCTTCATTCCTAGTGCAAAGCAAGTACTTAGAGAAAAAGGTATCAAAACCCTAACATTTTCTTTATTCACCATAGTTTCAACTTTTGCAAGTTGTGGCTATGTCCCCACAAATGAAAATATGATAGTTTTCAAGAAGAATTCTGGCCTTCTTCTTATTATTCTCCCATATATCCTTCTTGGTAACACCTTATATGCACCATGCTTGAGGTTTGTGATTTGGGTTCTTGAGAAAATTACCAAAAGAGAGGAATTTTCATACTTGCTTAAGAATTCAAAGGAAATAGGTTTTGGTCATTTGCTACCTCCCCTTCATTCTTGGCTACTTGTTGCTACCGTTTTAGGGTTCAATATAATTCAATTTGTGATTTTTTGTTCCATGGAGTGGGGAACACAAATCATGGATGGTTTGAATCCTTATCAGAAATTTGTAGCGTCTTTGTTTCAAATCACAAATGCTAGACATTCTGGTGAATCCGTTTTTGATCTCTCTACCATCTCTTCAGCCATATTGGTTCTCTTCGTTGTCATGATGTACCTTCCACCATACACAACATTCTTGCCCATAATGGACCACGAGACCGAAAATGAT 1245 0.347 MMNFSLFGRKLQHLCSSPYFHLNFSSFFIQLCYFMILSLFGYLGLKISKTRTHIKPNDFDLFYTSVSTSTVSSMTAVEMEVFSNSQLILMTFLMFVGGEVFTSLLELIFARFSNNNNYNNSSTSMKNSLPIKVVNDQIELGLVSIPNHHSSQDHKQVNDVNGINNNNNNVPSGTTIVSYNNNKDMLLRSNSLKYLSHVVLGYFLLLQFVGTFLVSMYMSFIPSAKQVLREKGIKTLTFSLFTIVSTFASCGYVPTNENMIVFKKNSGLLLIILPYILLGNTLYAPCLRFVIWVLEKITKREEFSYLLKNSKEIGFGHLLPPLHSWLLVATVLGFNIIQFVIFCSMEWGTQIMDGLNPYQKFVASLFQITNARHSGESVFDLSTISSAILVLFVVMMYLPPYTTFLPIMDHETEND 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03388 415 Pfam Cation transport protein 190 398 IPR003445 GO:0006812|GO:0008324|GO:0055085
Aip05g03388 415 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 4 413 - -
Aip05g03388 415 PANTHER SODIUM TRANSPORTER HKT1 4 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03388 Aip-Chr5 140092607 140100794 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03388 46 412 Inorganic Solute Cotransporters AT4G10310 45.405 8.53e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03388 K24976 - gmx:100779582 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03388 05 140092607 140100794 Aip05g03388 05 140092607 140100794 ECH