Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03372 ATGGGGAGGAAGTGTTCACATTGTGGGAACATAGGGCACAATTCAAGAACATGCACAACATCACCTATGATGATGATGATGAGAGGAGGAACAAATAATAATAATAATAATAATAGTTTTGTAGGGCTTAGGCTCTTTGGGGTTCAACTTGATATATCATCTTCATCTTGTTGTGTTGCAATGAAGAAAAGTTTTAGCATGGATTCATTGCCCTCTTCATCTTCAACAACTACTACTACTACTTCTTCCTTCTCATCTTCAAGATTACCCATTGATGATAACATCACCCTCAACAACAATAATTCTTCTGCTTTTGGCTACCTTTCAGATGGTCTCATCGTTCCCCCTCAAGACAGGAAAAAGGGAGTTCCATGGACAGAAGAAGAGCACAGAACTTTCCTTGTTGGACTTGAGAAACTAGGAAAGGGTGATTGGAGAGGAATATCTAGAAACTATGTGACCACAAGAACTCCAACCCAAGTTGCAAGCCATGCTCAAAAGTACTTTCTCAGATTGGCAACTATCAATAAGAAGAAGAGACGCTCAAGTCTCTTTGACTTGGTTGGCATAGGCAACAATAACACAAAAACAGAATTTCATGATGATGTTGGTGGCATATCTAATTGCAAATCAGGAGATTCAAGTGTTATTGTTTGTAATGAGTCAAAATTAGAAGAAGTTGTTGAGAATAATGACATTGATCATGCCACTCTATCACTTCTAGGGCGCCTTACCCCATTTCATCAAGAAATCAAATCAGATAATGACCTAAAAGTAAATACCATTAACAATGATAATTATAATCATAATCATCAACCATTTTGGCCTCATCATCATCATCAACAACACATGAATTCTTCGTCAACAGTGCCTGATTTGGAGCTCACTCTTGCAGCCCCAGAAGATCAAAATAAATCAACATCCCCCAGTTCCTTCTTTTTTGGTCCAATTAGTGTTACTTAA 963 0.378 MGRKCSHCGNIGHNSRTCTTSPMMMMMRGGTNNNNNNNSFVGLRLFGVQLDISSSSCCVAMKKSFSMDSLPSSSSTTTTTTSSFSSSRLPIDDNITLNNNNSSAFGYLSDGLIVPPQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGIGNNNTKTEFHDDVGGISNCKSGDSSVIVCNESKLEEVVENNDIDHATLSLLGRLTPFHQEIKSDNDLKVNTINNDNYNHNHQPFWPHHHHQQHMNSSSTVPDLELTLAAPEDQNKSTSPSSFFFGPISVT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03372 320 MobiDBLite consensus disorder prediction 300 320 - -
Aip05g03372 320 CDD SANT 124 169 IPR001005 -
Aip05g03372 320 Pfam Myb-like DNA-binding domain 124 169 IPR001005 -
Aip05g03372 320 MobiDBLite consensus disorder prediction 67 87 - -
Aip05g03372 320 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 310 - -
Aip05g03372 320 Gene3D - 123 175 - -
Aip05g03372 320 SUPERFAMILY Homeodomain-like 119 173 IPR009057 -
Aip05g03372 320 PANTHER TRANSCRIPTION FACTOR KUA1 1 310 - -
Aip05g03372 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 173 IPR017930 -
Aip05g03372 320 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Aip05g03372 320 ProSiteProfiles Myb-like domain profile. 117 169 IPR001005 -
Aip05g03372 320 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 120 171 IPR006447 GO:0003677
Aip05g03372 320 ProSiteProfiles SANT domain profile. 125 173 IPR017884 -
Aip05g03372 320 SMART sant 121 171 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03372 Aip-Chr5 139837138 139839648 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip05g03372 Myb_DNA-binding 2.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03372 - - adu:107490116 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03372 05 139837138 139839648 Aip05g03372 05 139837138 139839648 ECH