Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03370 ATGGTAGCAGTGCCAAATCAGGATCACCATCATTCCTCCTTCATCTTCAAAAGGCTCAAGAGGGAGGAATGCAGCCACACCAAACATGATTCTATCTTCTCCAAATGGAAGGTTCTTCATACAATAATATTACATATTTACAAAACACAAAATTGCTTACTTCAAAGGAATTTGATCAATTTTGTTGCTGAATTGTTGCAGATTTTAATTGGTGCTTCCGATTGGGAAGATCATTCAAAGGGAAAAGAAGGATGTGCAAGATACAGGATCCATAACCTGCCAGAAAAAGCTTGTCCAGGTGTATATGAGCTTGGAATAGCTGTGTCATCAAGGAGTGATTTGGGGAGGCAAATTTACAAACTTGCCCCTGAGTGTGTAGTTGTGACTTACCTTGGAGAAACTGATAATGTAAGGGATAGGTTGCAATGCTATGGCAGAGATGGATCTCATTTGCACACCAAAACTTCTCTTGAATACTCAATTTATGATTCTCTCCAAAAGAAGAGGCCATTGTTTCAAGAGATTTTTTCACAGGGATACCCTATTGTTTATAGATGGGTTGCTATGAACAATAAAGAAGAGGCCAAGAAAATAGAGTCTCAGCTGCTCAAAACATTTGATTATGCATGGAATATAAGCAGTAATGGTTGCCGGCGGCCGAACGATATTCTTCAAAAGATAAACAAGATTTCTTCCAGCACAAGAACAATCTCAAATATGGCCAGGGAGCTCCTACCTTTCACTCGAAAACAAGTCGGTATCCGAATCAAAGTAGATGAAGAAGAAGAAGACAGTGATGGCATCTACAGTTTCCTATCTAGGGTGTTCAAATTCAACAAATCAAGGCCTAGGAAAGTCAAAAATATCGTCATTGCCAATCAGCAGGATGCTATAATTTGTGGGGTGGCTTTAGGTGATGGTTCTGTCTGTATAAATACACCAGCTGAAAGAAGAAAGAGGTGTCCTCAACACAAAGGAATGAGAATTAATAATGTGTCCCCTGCCAAAGCATTTGTATCCCCAAAATCAAAGAGCAATTTGGTTTCAGAAATCAATAAGTTTATGGACCAAAATGTTAGCAATGATGATGTACAAGGCATTCCAAAAAAACCAGTTGAAGAGAGTAGTAGTGAAACCAATATATGTGGAATCATATTGTATGATGGTTCACCTTGTAGGAGAGTACCGGTTAAAGGAAGGAAAAGGTGCCAAGAGCATAAAGGAAAGAAAATTTGTGCCAAGCAGAAGATGATTTAA 1257 0.3874 MVAVPNQDHHHSSFIFKRLKREECSHTKHDSIFSKWKVLHTIILHIYKTQNCLLQRNLINFVAELLQILIGASDWEDHSKGKEGCARYRIHNLPEKACPGVYELGIAVSSRSDLGRQIYKLAPECVVVTYLGETDNVRDRLQCYGRDGSHLHTKTSLEYSIYDSLQKKRPLFQEIFSQGYPIVYRWVAMNNKEEAKKIESQLLKTFDYAWNISSNGCRRPNDILQKINKISSSTRTISNMARELLPFTRKQVGIRIKVDEEEEDSDGIYSFLSRVFKFNKSRPRKVKNIVIANQQDAIICGVALGDGSVCINTPAERRKRCPQHKGMRINNVSPAKAFVSPKSKSNLVSEINKFMDQNVSNDDVQGIPKKPVEESSSETNICGIILYDGSPCRRVPVKGRKRCQEHKGKKICAKQKMI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03370 418 Pfam GIY-YIG domain-containing protein 67 224 - -
Aip05g03370 418 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 15 413 IPR038909 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03370 19 413 HRT Transcription Factor Family AT5G56780 39.225 2.80e-87 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Aip05g03370 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03370 - - adu:107490117 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03370 05 139813090 139815339 Aip05g03370 05 139813090 139815339 ECH