Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03358 ATGGTTCCTCTTACTTGTATTGGCAAGGTCCTTGGTACTCTTGTTGTTTCTCTTCTATTCCAAATACCTGTCATGGAACGTGTAATTCTTGGTCTGCTTATGAATACTAAAGGCTTCATTGAAATTATAGTGCTCAACATTGGCTGGGAACAAAAGGTATTGAGCGATGAAGTATTTTCAATCATGGTTCTTGTAACAATTCTGATGACAACAATCATCTCACACACAGTGGCATTGATCCACAAGCCAAGAAAAAGGCACATATCATACAAGAACAGAACAATGCAAAGTATAGGAACAGATATTTGA 309 0.3722 MVPLTCIGKVLGTLVVSLLFQIPVMERVILGLLMNTKGFIEIIVLNIGWEQKVLSDEVFSIMVLVTILMTTIISHTVALIHKPRKRHISYKNRTMQSIGTDI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03358 102 Gene3D - 1 89 IPR038770 -
Aip05g03358 102 PANTHER CATION/H+ EXCHANGER 3 1 99 - -
Aip05g03358 102 PANTHER CATION/H + ANTIPORTER 1 99 - -
Aip05g03358 102 Pfam Sodium/hydrogen exchanger family 6 77 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03358 Aip-Chr5 139681672 139682076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03358 4 101 Antiporter Super Family AT2G13620 51.020 2.00e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03358 - - aip:107642147 198.749