Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03353 ATGCATAGATCTAGAAATCTTGGTGGACACAATGGCACCCTAGCTTGCTCTCTATATATAACACTAACACTCACACTCTCATCCTCAGATTATAATACATACTTCTCCAACATCCTAGGATTCTCAAGTAGAACTGGAAAACATAGAAGAACCAATGGATTCCGATGCTCCAGTCATACTACAGAGCGAAAAGTTAGCAAAGGCCAACTACTGTCAATATTGTTGAAGCTATTGAATGCCAAAAAGACGATTGAAATTGGAGTGTTTACTGGCTACTCTCTTCTTCTTACAGCTCTTAACATTCCTCTTGATGGAAAGATTACAGCCATAGATATTGACAGAAAAGCTTATGAGGTTGGGTTACCATTCATCAAAAAGGCTGGAGTAGAGCACAAGATTGATTTTATAGAGTCTCCAGCTCTGCCAATTTTGGACAAACTATTGCAAGATCCTTCAAACTTGGGAACTTATGACTTCGCCTTCATTGATGCTGACAAATGGAGCTATGTGAAGTACCATGAGAGGCTCATAAATCTGGTGAAGGTTGGTGGGTTGCTTGTCTACGATGACACACTCTTAGGTGGATATGTTGTGTGGCCTGAAGAGGATGTTGAAGCTTCTCACAGACCATATCGAAAAGCTTTAATCGAAGTCAACGACGCACTCGCCACAGACCCACGCGTTGAGATCGCTCTTGCTTCTGTCGGAGACGGACTCACTATTTGCAGGCGCATTGCATGA 741 0.4224 MHRSRNLGGHNGTLACSLYITLTLTLSSSDYNTYFSNILGFSSRTGKHRRTNGFRCSSHTTERKVSKGQLLSILLKLLNAKKTIEIGVFTGYSLLLTALNIPLDGKITAIDIDRKAYEVGLPFIKKAGVEHKIDFIESPALPILDKLLQDPSNLGTYDFAFIDADKWSYVKYHERLINLVKVGGLLVYDDTLLGGYVVWPEEDVEASHRPYRKALIEVNDALATDPRVEIALASVGDGLTICRRIA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03353 246 PANTHER O-METHYLTRANSFERASE-RELATED 66 245 - -
Aip05g03353 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 244 IPR029063 -
Aip05g03353 246 CDD AdoMet_MTases 84 193 - -
Aip05g03353 246 Gene3D Vaccinia Virus protein VP39 44 246 IPR029063 -
Aip05g03353 246 Pfam O-methyltransferase 64 245 IPR002935 GO:0008171
Aip05g03353 246 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Aip05g03353 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Aip05g03353 246 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 66 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03353 Aip-Chr5 139633027 139636448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03353 68 245 Monolignol Biosynthesis Gene Families AT4G26220 60.674 4.15e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03353 K00588 - gmx:100800911 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03353 05 139633027 139636448 Aip05g03353 05 139633027 139636448 ECH