Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03349 ATGGAATGCTATGGTGGGATGGACAAGATAATCAATTTGTCATCGGATGAAAGTCAATCTGAGTTAGGCCTTCCAAACAATGATGTTGTTGATGAGGATGATTTAGGAAAGGCTGAGTTGTTGTCGGATGAGGATGGTCGTGTGTATGGAGACGTGATTGGGTTGAGTGTCGAGGACATAATGAAAATGGTGTTTCAAAGTGAGGAGCGTGCATATGAGTTTTATTCGAGGCTAGGGAAATGCAACGGATTTGGGATCTATAAGGGAGACTATGCGAAGGATGAAGATGAGACTATAATGAGAATAAGGTTCTTCTGTAACAGGGTTGGCCTAAGGGATGGAAAGCAGTACAACAGATTAGACAAGAAGAGATCTCACAGGCCTGAGACACACACGAATTGTCAGGCCTTGATGTTTGTATACCTTGATAAGGGGAGCTCAATTTGGAAGGTTCGGAAAGTAATCCTCGAGCTTAACCATGAACTGATGCCTAGGGGAATGGTTCACATGATCCGAAGTTGCCGGGTGATATCTGGGTTCGCAAAGGGCCACATGGATGGAATGCATGCGTATGGCTTACCGATATCTAAGATACTAGGGTACATGAGCTGGGATTGA 618 0.4434 MECYGGMDKIINLSSDESQSELGLPNNDVVDEDDLGKAELLSDEDGRVYGDVIGLSVEDIMKMVFQSEERAYEFYSRLGKCNGFGIYKGDYAKDEDETIMRIRFFCNRVGLRDGKQYNRLDKKRSHRPETHTNCQALMFVYLDKGSSIWKVRKVILELNHELMPRGMVHMIRSCRVISGFAKGHMDGMHAYGLPISKILGYMSWD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03349 205 Pfam FAR1 DNA-binding domain 73 164 IPR004330 -
Aip05g03349 205 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 171 - -
Aip05g03349 205 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03349 Aip-Chr5 139624832 139625449 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g03349 FAR1 1.7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03349 - K17604 aip:107633916 331.257