Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03343 ATGTCCAGAAACATGGCCAATTCCTCAACATTCTTCTTATTGTGGATGCTTTGTAGTGTTGCTCTTGCAATCTTCATTCAGGCACAACAACAAACAGGGTTCATAAGCATTGATTGTGGTAGTCCTGAGAATCTTTCATACACAGATGATGTAACAAATATAAAGTATAGCAGTGATGGATCTTATATACAAACTGGTGTTAACAAAAACATTTCCACTGAATATGCATACCCGAAAAATCCCAATTTGCCAGAGCCACTCTCTGATCTCAGAAGTTTCCCTCAAGGAGTGAGGAACTGTTATGGCTTAATAGCTGGAAGAAAAGGGAATTTACATTTTATCAGGGCTTCCTTCTTGTATGGAAACTACGACGGCGAAAACAATCTCCCTGAATTCGATCTTTATGTCGGCGTCAATTTCTGGTCATCGGTGACATTTAGAGATGCTTCAGAGGAAGTTGTATTGGAAATTATCAGCATGGCAGAATCAGATGTTACTAATGTTTGTCTTGTAAATAAGGGAAAAGGAACTCCTTTTATCTCAGCATTGGAACTTAGGCCTATTTATAGTCCTATTTATAATGCAGAGTTTGGTGAATCTTCTTCTTTGTTACTTTTCAAAAGATGGGACATTGGTTCAATGATCAATGCAAGCGGAAGATATCAAGATGACGTCTATGATAGAATTTGGTCCCCTTATGATTCCCCCTCTTGGGATTCTGTAAAAACTTCTTCAGAAATCAATGTCAATGCTAATGGTTATAGAGCACCGTTTGAAGTCATGAAGAATGCTGCTAGGCCTAGGAATAACAGCGATGCTTTGGAACTTTCTTGGACCCCAGATAAACCGAATTCAAAGTTTTATGTCTACTTGTACTTTGCTGAATTGGATCAGCTTCAGAAAACACAGTTGAGGAAGTTTAATATATCTTGGAATGGATCTCCCTTGTTTGAACCTTTAGTTCCACGCTACTTATATGCAACTGTTGTTTCTAATTCGAAACCATTGGTGGCGAATGAACATCATGTTTCTATACAGAAGACAAAAGATTCAACCCTTCCACCTATTCTTAATGCGGTTGAGATTTATGTTGTAAGAGAGCAAGACACAATTCCAACACTTGAACAAGATGTTGATGCTATGGTGGACACCAAAGAAAGATATGGAGTTCAAAGAAATTGGGTGGGCGATCCTTGTGAGCCAAGGAACTACTCTTGGGAGGGCATAAGATGCAACTACAGCGCTTCGCTTCCTCGCCAAATTATATCACTGAATCTAAGCTCAAGTGGTTTGAGTGGAATAATAGCTCCTTCCATTGCCAATCTCTCTTTGCTGGAATCATTGGATTTATCTAACAACAGCTTAACCGGAACAGTCCCTCGGTTTTTAGAAGAACTGAGATTCCTTAAATATTTGAACTTACAAGGTAACAAATTATCAGGTTCTGTCACTAATACTCTTGAAGAAAGATCAAGGGCTGGATTACTAACAATGAAGGTGGATGATCAAAATCGATGCGCCTGGGGTGACAAAAAGAACAAAAAGGTTGTTGTTCCCATAGTCGCCTCATTATCATCGGTTTTAGCTCTATTGGTTGTTTTCATCTTGATTTGGAAGTTTATGAGAACTAATAACTCAGATGAGGAGATGAGCAAGCCCATCAATGAAGTAAGAACCGTAGCGTCAAGGAACTGGCAATATACCTATGTCGAGGTCTTAGAGATCACGGAAAACTTCAAAATGGTCATTGGGAAAGGAGGATTTGGAACTGTGTATATTGGTAAGACAAAAAATGGCAACCAAGTTGCAGTTAAGGTGTTTTCTCCATCATCATCATCACAGGGCCCAAAGGAATTTCAGACCGAGGCTGAGCTCTTGATGACTGTTCATCACAAAAATTTGGTATCATTCATTGGTTACTGTGATGATGATAATAAAATGGCACTCATATATGAGTACATGGCGAATGGCAACCTAAAAGATTATCTCTCAGTTAGAAACTCACAAAACTTGAGCTGGGAAAGGCGAATTCAGATAGCGATTGATGCTGCAGAGGGATTGGATTACCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTCAAGTCGGCTAACATTCTTTTAAACGAAGACTTAGAAGCGAAGATAGCCGATTTCGGCCTCTCTAGGGTGTTTCGCAATGAAAAACAAAATGTAGAAGTATCAGCAGTCCATCAGAATGATAACAAAAATACAGAATCAGCAGTCATGGGAACCACTGGTTACCTTGATCCAGAATACTACAAATTGAGGAACTTGAATGAGAAGAGTGACATCTACAGCTTTGGAATTGTTCTATTGGAACTAATCACGGGGCAGCCGGCCGTATTAAAAGGCGAGCAGCGAATGCACATTCTTGATTGGTTAAGGCCAGAGCTTGAAAGTAAAGATTTGAGCAGAGTATTGGATTCAAGGCTGCAAGGGCAATATGATGAAAATGCTGCATGGAAAGCATTAGGAATAGCAATATCATGCACTGCATCAACCTCCATTCAGAGGCCTACAATGAGTGTTGTGTTATCAGAATTAAAGCAGTGTTTGAAGATGGAATTGCCTAGGCCTAGTGAAACAATTATGGTGCCAAGAAATGTGTATAGTGAACTTTATAGTTCATCTGAAGCATATTCCATGGATAGTGAATCAATCACCTACCCTTTCCCAAGATAG 2712 0.3953 MSRNMANSSTFFLLWMLCSVALAIFIQAQQQTGFISIDCGSPENLSYTDDVTNIKYSSDGSYIQTGVNKNISTEYAYPKNPNLPEPLSDLRSFPQGVRNCYGLIAGRKGNLHFIRASFLYGNYDGENNLPEFDLYVGVNFWSSVTFRDASEEVVLEIISMAESDVTNVCLVNKGKGTPFISALELRPIYSPIYNAEFGESSSLLLFKRWDIGSMINASGRYQDDVYDRIWSPYDSPSWDSVKTSSEINVNANGYRAPFEVMKNAARPRNNSDALELSWTPDKPNSKFYVYLYFAELDQLQKTQLRKFNISWNGSPLFEPLVPRYLYATVVSNSKPLVANEHHVSIQKTKDSTLPPILNAVEIYVVREQDTIPTLEQDVDAMVDTKERYGVQRNWVGDPCEPRNYSWEGIRCNYSASLPRQIISLNLSSSGLSGIIAPSIANLSLLESLDLSNNSLTGTVPRFLEELRFLKYLNLQGNKLSGSVTNTLEERSRAGLLTMKVDDQNRCAWGDKKNKKVVVPIVASLSSVLALLVVFILIWKFMRTNNSDEEMSKPINEVRTVASRNWQYTYVEVLEITENFKMVIGKGGFGTVYIGKTKNGNQVAVKVFSPSSSSQGPKEFQTEAELLMTVHHKNLVSFIGYCDDDNKMALIYEYMANGNLKDYLSVRNSQNLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLNEDLEAKIADFGLSRVFRNEKQNVEVSAVHQNDNKNTESAVMGTTGYLDPEYYKLRNLNEKSDIYSFGIVLLELITGQPAVLKGEQRMHILDWLRPELESKDLSRVLDSRLQGQYDENAAWKALGIAISCTASTSIQRPTMSVVLSELKQCLKMELPRPSETIMVPRNVYSELYSSSEAYSMDSESITYPFPR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03343 903 Gene3D Ribonuclease Inhibitor 378 495 IPR032675 -
Aip05g03343 903 Gene3D Phosphorylase Kinase; domain 1 549 653 - -
Aip05g03343 903 SMART serkin_6 577 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03343 903 SUPERFAMILY L domain-like 402 486 - -
Aip05g03343 903 Pfam Malectin-like domain 37 364 IPR024788 -
Aip05g03343 903 Pfam Leucine rich repeat 423 479 IPR001611 GO:0005515
Aip05g03343 903 PANTHER OS07G0107800 PROTEIN-RELATED 8 876 - -
Aip05g03343 903 ProSiteProfiles Protein kinase domain profile. 577 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03343 903 PANTHER BNAC07G41790D PROTEIN 8 876 - -
Aip05g03343 903 Gene3D Transferase(Phosphotransferase) domain 1 654 872 - -
Aip05g03343 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Aip05g03343 903 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524
Aip05g03343 903 Pfam Protein tyrosine and serine/threonine kinase 580 858 IPR001245 GO:0004672|GO:0006468
Aip05g03343 903 SUPERFAMILY Protein kinase-like (PK-like) 560 858 IPR011009 -
Aip05g03343 903 Gene3D - 213 365 - -
Aip05g03343 903 CDD STKc_IRAK 583 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03343 Aip-Chr5 139584942 139589365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03343 5 889 Receptor kinase-like Gene Family AT4G29180 51.609 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip05g03343 Malectin_like 1.2e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03343 - - adu:107490162 1710.27