Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03332 ATGAAGATTGAGGAATTGGAGGATGGGGAGTGTGTTATGGATGAAAGAGGGAATCACGAGAGGCAGATCGTGAGGGTTGATGCGAAGAGAGCGTTGGTTGGAGCGGGTGCAAGGATCCTGTTTTACCCTACGCTTTTGTACAATGTGCTTCGGAATAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTTGATGAGTTTGTGTTACTGGGCGCTGTTCCATTCCCAAAAGATGTTCCACACTTGAAGAAACTCGGTGTGGGTGGTGTAATTACTCTAAATGAGCCTTATGAAACTTTGGTGCCTTCTAAGTTATATCATACTTATGGGATTGATCATCTGGTAATTCCTACAAGGGATTATCTCTTTGCCCCGTCATTTGGGGATATAAGCAAGGCTGTTCAATTCATTCATCAGAATGCAAGTAGTGGAAGAACTACTTATGTTCACTGTAAAGCTGGGCGAGGGAGGAGTACAACAATTGTTCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCTGCAATGGAATATGTGCGATCTCGGAGGCCTAGAGTGCTATTGGCACCGTCTCAATGGAAGGTATGGTGTAAATATCGAGTTTTTTTTCTCTATGATTGTACCCTTTTAGTTTTACATATTCTTGCTTGTTGA 660 0.4273 MKIEELEDGECVMDERGNHERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFVLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSKLYHTYGIDHLVIPTRDYLFAPSFGDISKAVQFIHQNASSGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAAMEYVRSRRPRVLLAPSQWKVWCKYRVFFLYDCTLLVLHILAC 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03332 219 CDD PTPMT1 60 197 IPR044596 GO:0004721
Aip05g03332 219 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Aip05g03332 219 SMART ptp_7 102 204 IPR003595 -
Aip05g03332 219 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Aip05g03332 219 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8 ISOFORM X1-RELATED 1 201 - -
Aip05g03332 219 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Aip05g03332 219 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 201 IPR029021 -
Aip05g03332 219 Pfam Dual specificity phosphatase, catalytic domain 82 201 IPR000340 GO:0008138|GO:0016311
Aip05g03332 219 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Aip05g03332 219 Gene3D Protein tyrosine phosphatase superfamily 60 203 IPR029021 -
Aip05g03332 219 PANTHER - 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03332 Aip-Chr5 139291198 139293970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03332 4 201 Protein tyrosine phosphatase (PTP) family AT2G35680 68.844 3.81e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03332 - - gmx:100817410 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03332 05 139291198 139293970 Aip05g03332 05 139291198 139293970 ECH