Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03331 ATGAAAAGAAGATATGGACACATTCTTGAGAAGGTCAAGTCAAAGTTGAAGGGGTGGAAACAAAAGATCTTGTCTATGGTAAGTAGGGTAGTTCTTGCGCAAACAGCAATTGGCCCAGTAGCCAACATTGCAATGCAACATGGAAGAGTTCCTAAAACTATTTGTACCAATATTGAGAAGACTCAGAGAAGCTTTGTATGGGAATCGAATGAAGACAATAGAAAAGTCCACATGATAAAGTGGGACATATTGTGCAAACACAAATATGAAGGTGGGTTGGGGTTCAAGAGGCTTGAGCATATGAATACTACTTTCCTGACTAAAATTTGTTGGGAGATGGTAATGAAACCTAACCAACTATATGGACAAGGGTGTTGTGGAGCAAGTACCATGTTGAGGGTTGGAAATGAAGATGATACCAAGTTTTGGGTGGACAATTGGCTGAATATGGAAATCTTGCCTCAGAGATTATATCCTACCAAATGCAACGGTGGAAGTCAAGAAGTATCCTCCCATTATAACAACAAACACCACCTCAAAGAACACAAAAAGCAGTGGTGTTTGCTGTTTAGTTCACCTCACCCTTCTAATCTCACTCACCGCCACCGTTATGTTCTGACACAGAAAATTTTTCATCCAAGACAAGTCAACATCTTTTACAGAAAAAAGTTGTACCAAGGTGTTGGTGTTGGTGTTGGCAATGGTGGTGGAGGAGGAGTGGTTTGGGTTGGGGGAGGGGTTAACAACCCACAACCCTCTGGATCTTCTTCAGAATCAAAGCTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAATTCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTGTCAAAGAGCTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGGTTCACTGGTACTGTTCCTGATGAATTCAGAGACCTCGACACTCTTGAAGAATTTGACCTCAGCAACAACCAATTCTCAGGTTCTTTCCCTTCTGCTACTTTGTACATGCCAAGCCTCATCTACTTGGACCTCAGGTTCAACTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCACTGTTTCTCAACAACAATCAATTTGAAGGTGAAATCCCTCAGAATCTTGGAAATTCCCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGGAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGCTATTCACTGAGATTCAAGTTCTGGATGTTAGCTACAATACTCTCATGGGTCATGTGCCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGGAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCAAGGCTTTTCTTCAGGAATGTGGGTTTTGATGTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGCGGTTCTCTGGCTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 1851 0.4236 MKRRYGHILEKVKSKLKGWKQKILSMVSRVVLAQTAIGPVANIAMQHGRVPKTICTNIEKTQRSFVWESNEDNRKVHMIKWDILCKHKYEGGLGFKRLEHMNTTFLTKICWEMVMKPNQLYGQGCCGASTMLRVGNEDDTKFWVDNWLNMEILPQRLYPTKCNGGSQEVSSHYNNKHHLKEHKKQWCLLFSSPHPSNLTHRHRYVLTQKIFHPRQVNIFYRKKLYQGVGVGVGNGGGGGVVWVGGGVNNPQPSGSSSESKLDGAYTALQAWKSAITDDPKKILGTWVGPNVCSYKGVFCDFTEDEMGASASAFPVVAGIDLNHANLQGTLVKELSLLTDMSLFHLNSNRFTGTVPDEFRDLDTLEEFDLSNNQFSGSFPSATLYMPSLIYLDLRFNYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEIQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDVSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVSASKHTNSTSSSP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03331 616 Gene3D Ribonuclease Inhibitor 432 554 IPR032675 -
Aip05g03331 616 Pfam Leucine rich repeat 344 397 IPR001611 GO:0005515
Aip05g03331 616 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 224 616 - -
Aip05g03331 616 Pfam Leucine rich repeat N-terminal domain 265 300 IPR013210 -
Aip05g03331 616 SUPERFAMILY L domain-like 265 550 - -
Aip05g03331 616 Gene3D Ribonuclease Inhibitor 264 431 IPR032675 -
Aip05g03331 616 PANTHER LRR/EXTENSIN 224 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03331 Aip-Chr5 139261362 139265922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03331 251 589 Leucine-rich Repeat extension Gene Families AT3G24480 48.696 4.49e-104 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03331 - - gmx:100775544 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03331 05 139261362 139265922 Aip05g03331 05 139261362 139265922 ECH