Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03318 ATGGGGAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGGATAAGAAGAGACAAAGAACAACAACACAAACAAGAAAACTCAAACTATGGAGACCCCAGAAGCATGAAATTCTCTTCATCTTCTTCTACTACTTCTGCTGCTCAAAGAAATTCAAGTAATTCTAGAGTTCTGTGTCACAATCCAGCTACCATTCCACCAAACATTTCTCCAGCTGAAGCAGCTTGGTTGCAATCTTTCTACAATGAGACAGAGAAGGAGCAGAACAAGCATGCCATTGCTGTTGCTGCTGCTACTGCAGCTGCAGCTGATGCTGCTGTGGCAGCAGCACAGGCTGCAGTTGCAGTGGTTAGGCTCACCAGCCATGGAAGAGGTACCATGCTTGGTGCTGGACATGAGATTTGTGCTGCCACCAAGATTCAGACAGTGTTTAGAGGCTACTTGGCAAGGAAAGCACTGAGAGCCTTAAAGGGATTGGTTAAGTTACAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCATGGAATGCAGGCACTTATCAGAGCTCAAGCCACAGTGAGGTCTCAGAAAAAATCTCAAGCATTCATGGCCGGAAAGAATGATTCATATAGGTCTCAAATCCGTGCACGAAGATCCATGGAGAGATTTGATGACACTAGGAGTGAGTACACAGCTCCAACTCATAGTAGAAGGTTATCATCTTCATTTGATGCCACAATTAACAACAATAACAGTTTTGATGGTAGCCCCAAAATTGTGGAAGTGGACACTGGTATTAGGCCTAAGTCAAGGTCCCGGAGAACCAACACATCAATGTCGGATTTTGGTGACGACCCTTCGTTCCAAACAATTTCCTCTCCCCTTCCAATCCCATGTCGGACACCAGGGCGCTTGTCCATACCGGATCATTCGGATTGGGGGCTGACAGGGGAAGAGTGCAGATTCTCAACTGCACAAAGCACTCCAAGGTTTGCAACAAGCACTTGTAGTTGTGGATCAGTTGCAGCCATGACACCAAAGAGTGTGTGCAATGAGAGCTTTTTCTATGGGAATTATCCGAATTACATGGTGAGCACGCAGTCTTTCAAGGCAAAGTTGAGGTCTCATAGTGCTCCAAAGCAAAGGCCAGAGCCAGGGGGTGCAAGGAAGAGGCTTACCCTGAATGAGATGATGGAATCTAGGAACAGTTTGAGTGGGGTTAAGATGCAGAGGTCATGCTCACAGATTCAAGAAGCCATTAACTTCAAGAATGCTGTGATGGGTAGGCTTCACACTAGGGACGCAGACAGAAACCACTTCCAAAAGAGGAGGTGGTAA 1332 0.4647 MGRATRWLKNLFGIRRDKEQQHKQENSNYGDPRSMKFSSSSSTTSAAQRNSSNSRVLCHNPATIPPNISPAEAAWLQSFYNETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMLGAGHEICAATKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHGMQALIRAQATVRSQKKSQAFMAGKNDSYRSQIRARRSMERFDDTRSEYTAPTHSRRLSSSFDATINNNNSFDGSPKIVEVDTGIRPKSRSRRTNTSMSDFGDDPSFQTISSPLPIPCRTPGRLSIPDHSDWGLTGEECRFSTAQSTPRFATSTCSCGSVAAMTPKSVCNESFFYGNYPNYMVSTQSFKAKLRSHSAPKQRPEPGGARKRLTLNEMMESRNSLSGVKMQRSCSQIQEAINFKNAVMGRLHTRDADRNHFQKRRW 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03318 443 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Aip05g03318 443 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 429 - -
Aip05g03318 443 Gene3D - 132 184 - -
Aip05g03318 443 ProSiteProfiles IQ motif profile. 135 160 IPR000048 GO:0005515
Aip05g03318 443 PANTHER IQ-DOMAIN 5-RELATED 1 429 - -
Aip05g03318 443 MobiDBLite consensus disorder prediction 13 61 - -
Aip05g03318 443 Pfam Protein of unknown function (DUF4005) 326 404 IPR025064 -
Aip05g03318 443 MobiDBLite consensus disorder prediction 269 294 - -
Aip05g03318 443 MobiDBLite consensus disorder prediction 267 297 - -
Aip05g03318 443 Pfam IQ calmodulin-binding motif 159 173 IPR000048 GO:0005515
Aip05g03318 443 Pfam IQ calmodulin-binding motif 134 153 IPR000048 GO:0005515
Aip05g03318 443 SMART iq_5 131 153 IPR000048 GO:0005515
Aip05g03318 443 SMART iq_5 154 175 IPR000048 GO:0005515
Aip05g03318 443 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03318 Aip-Chr5 139016309 139018881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03318 1 407 IQD Protein Family AT3G16490 49.403 9.22e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03318 - - zju:107432812 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03318 05 139016309 139018881 Aip05g03318 05 139016309 139018881 ECH