Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03306 ATGAGCACAAGGAGTATAAACATCAGACTAGACTGGAGAAAAAGATCTATTATTTGCATGGGCACTGCAAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATCGTGCACAGAGACATCAAAGCCAGCAACATACTACTCGACACAGACTTTAATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTGTTTCCTGATGACATCACTCATATTAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCGCCTGAATATGCAATTGGTGGCAGAAGCAGTTCAAGGACAATCTGGGGAGACTCATACAAACTCCTCTTGGAATGGGTTGTTGATATGTTGTCCAAGAAAACAAAGCTCAATGAGAAGCAACTCACAGCACTAGGTTTCTTCCAAGACTCAGGAGAGTCTTCTGTTTCACAAAATCATGACAAGGAAAAGGAAATCACTCTCGACGACGCTGCTGCCGCCGCCGCCGCCCCCGACGCCACCACCAAAGATGGTGAAAAAGCAACGGCCGCTCCGGTGATCACTCCTGAATTCAGGCTTGCAAATCACTTACTACTCTCCAAAGAAAGCGGCGGTTACAAGAACGTTGCTTTTTCGCCTTTGTGCATCAAACTCCTTCTTAGCATTGTCGCCGCCGGGTCCAACGGCCCGGTTTGTGACGAACTCCTCTCGTTTCTCCGGTCAGAATCCATCAACGATCTTAATTCCGTAGCAACTCAGCTCTTGTTCTCCGTGTTTGTCGACCGTTCTTCGAGCGGCGGGCCTCACCTCTCTTACGCGAATGGTGTTTGGGTTGACAAAACCCTATCTCTGAAGCCTTCCTTCTCACAAGTTTTGGAGAATACTTACAAGTCCACTTTTGCTTCACTTGATTTCACAAACACGGATGAAGTAGCGAAGGAAATTAACTCATGGGTTGAAAGGGAGACGAAAGGCGTTATTAAGAACTTGATTGATCCTGATTCAATCCAATTAACGGATTTGATCATGGCGAACACACTCTACTTTAAAGGATTATGGTGGGACAGCAACACCTTCAGACAAAAAGATACACGGGATGGTGACTTTCATCTCTTAGATGGGAGTTGCTCAGTGAAGGTTCCCTTCATGGATGGAAGTCACCGCCGTTACGCCATTGCTCATCATTATCAAGATTTCAAGGTCCTCAGTCTTGATTACAAGGTAGCCAGCAGCGAAAATGTCCCCAGAAGGAGGTACACCATGCATATTTTTCTTCCCGATGAAATCAACGGCTTGCCTGCTTTGGTTGAAAAGGTACGTAGGCAATACTCATTTGAGTAA 1314 0.4559 MSTRSINIRLDWRKRSIICMGTARGLAFLHEELVPHIVHRDIKASNILLDTDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAIGGRSSSRTIWGDSYKLLLEWVVDMLSKKTKLNEKQLTALGFFQDSGESSVSQNHDKEKEITLDDAAAAAAAPDATTKDGEKATAAPVITPEFRLANHLLLSKESGGYKNVAFSPLCIKLLLSIVAAGSNGPVCDELLSFLRSESINDLNSVATQLLFSVFVDRSSSGGPHLSYANGVWVDKTLSLKPSFSQVLENTYKSTFASLDFTNTDEVAKEINSWVERETKGVIKNLIDPDSIQLTDLIMANTLYFKGLWWDSNTFRQKDTRDGDFHLLDGSCSVKVPFMDGSHRRYAIAHHYQDFKVLSLDYKVASSENVPRRRYTMHIFLPDEINGLPALVEKVRRQYSFE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03306 437 Gene3D Transferase(Phosphotransferase) domain 1 2 128 - -
Aip05g03306 437 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 184 435 IPR000215 GO:0004867|GO:0005615
Aip05g03306 437 Gene3D Antithrombin, subunit I, domain 2 198 343 IPR042178 -
Aip05g03306 437 SUPERFAMILY Protein kinase-like (PK-like) 9 93 IPR011009 -
Aip05g03306 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Aip05g03306 437 Pfam Protein kinase domain 17 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03306 437 SMART serpin2 182 437 IPR023796 -
Aip05g03306 437 Pfam Serpin (serine protease inhibitor) 183 431 IPR023796 -
Aip05g03306 437 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03306 437 PANTHER SERPIN-ZXA-LIKE 184 435 - -
Aip05g03306 437 SUPERFAMILY Serpins 189 430 IPR036186 -
Aip05g03306 437 Gene3D - 344 432 IPR042185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03306 Aip-Chr5 138733195 138738656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03306 8 92 Receptor kinase-like Gene Family AT1G53420 69.412 1.56e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip05g03306 Serpin 2.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03306 K13963 - jre:108992353 230.335