Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g03297 | ATGGGTTCACCCCCAATGAATAAGGGAGAGAGGAAAATAGAGAGAGGTTCCATAGCTATAATCTTGAGATATGCAGATTGTGTTGATGTTTTGCTTATGTTAATGGGTGCTGTTGGAGCAGTTGGAGATGGCATGTCCACAAACATTCTTCTCATCTTCGCTAGCCGCATCATGAACAGCTTAGGATATGGCAACCAACAAAGTAGTGGCACTGCCAACAATTACATGTCCCAGGTTGAAAAGTGCAGCTTGTATTTTGTGTACTTGGGACTAGCAGTGATGGTGTTGGCCTTCATGGAAGGGTACTGTTGGAGTAAAACAAGTGAGAGGCAGGTGTTGAGAATTCGGTACAAGTATTTGGAAGCTGTTCTAAGACAAGAAGTGGGGTTTTTTGAATCACAAGAAGCAACTACTTCTGAAATCATCAATTCCATATCAAAAGACACTTCTCTCGTCCAAGAAGTCCTAAGTGAAAAGGTGCCACTATTCTTAATGCACTCATCATCATTCATCTCTGGGATTGCTTTTGCCACCTACTTCTCATGGAGGCTGGCCTTAGTAGCATTCCCAACACTTGTTCTTCTCATAATCCCCGGCATGATCTATGGCAAATACCTAATCTATTTGTCAAAGTCATCTGCCAAGGAGTACGGCAAGGCGAACGCCATCGTCGAGCAGGCGTTAAGCTCCATCAAAACCATTTATTCGTTCACAGCCGAGAGGAGAATCCTTGTGAGGTATTCAGAGATCTTAGAGAGAACCTCAAGGCTTGGAATCAAGCAAGGGATAGCAAAGGGTTTAGCTGTTGGAAGCACAGGTTTATGCTTTGCAATTTGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTTATGTACAAAGCTGAAAGTGGTGGAAGGATCTATGCAGCTGGAATTTGCTTCATTATGAGTGGACAATCCCTTGGAGTGGTACTTCCAGATTTGAAGTACTTGACCGAAGCATCAGTAGCATCCACAAGAATCTTCAACATGATTGACAGAAAAGCAGTAATTGATGGTGAAGACACAACAAAGGGAATAGTGCTAGACCAAATTAACGGGAACCTAGACTTTGAACATGTGAAATTCACATACCGTTCAAGACCAGACAACCTCGTACTCAATGACTTCAATCTGAGGGTTGAATCAGGCAAAACGGTTGCACTTGTTGGTGCAAGTGGGAGTGGAAAGTCAACGGCAATAGCGTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTTGACATAAAGAGCTTGCAGTTGAAGTGGTTGAGGGGTAAAATGGGGCTTGTGAGTCAAGAACATGCATTGTTTGGGACATCTATTAAGGAGAATATTATGTTTGGAAAGCTTGATGCTACCATGGATGAGGTTGTTGCTGCTGCTACTGCTGCTAATGCTCATAACTTTGTTAGGCAGCTCCCTCAGGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGACAAAAGCAGCGAATAGCAATTGCAAGAGCCATCATAAAGAATCCAGTGATTCTTCTTCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATTACTTGTCCAAAATGCCCTTGATCATGCCTCATTGGGCAGGACTACATTGGTTGTTGCACACAAGCTATCAACGGTCCGAAACGCAGATGTCATAGCTGTTGTCAACGGCGGTTGCATCATCGAAATCGGCACGCACAACGAGCTCATAACCCGTCCAAACGGCCACTATGCAAAGCTAGCAAAACTCCAAACACAACTCAGCTTTGATGATCAACAAGAAATATCCAATGCTCTTTCTTCTGCAGCAAGAAGCAGTGCTGGTAGAACCAGCACAGCAAGATCAACAAGCCCTGCAATGTTCCAAAAATCACCAATCCCTATTGATGATAACACCATAACCCCAGAATCATCTCTTGTTTCTCACCCTTCACCTTCTTTCCCAAGGCTTCTATCTCTGAATGCACCTGAATGGAAACAAGGTTTAATTGGTACTTTTTCCGCAATAGCTTTCGGCTCAGTGCAGCCCATATATGCCTTAACAATTGGTGGCATGATTTCTGCATTTTTCGCCGAAAGCCATAGTGAAATGATTCACAGAATCAGGACTTACTCTTTGATTTTCACTTCTCTTTCTCTTGCTTCCATCACACTCAACCTCTTGCAGCACTACAATTTCGCATACATGGGAGCAAAATTAACAAAAAGGATACGGCAGAGAATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTCGATGAAGAACATAACTCCAGTGGAGCATTGTGCTCAAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCGGATCGCGTTTCATTGCTTGTTCAAACAGCTTCTGCTGTCAGTATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGTGATGATAGCAGTGCAGCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCATGGCTGGCCGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGAGATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAACGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAATTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGAACACCGGTATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGNNNNTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAGTGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGACAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAAGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG | 3705 | 0.4359 | MGSPPMNKGERKIERGSIAIILRYADCVDVLLMLMGAVGAVGDGMSTNILLIFASRIMNSLGYGNQQSSGTANNYMSQVEKCSLYFVYLGLAVMVLAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFESQEATTSEIINSISKDTSLVQEVLSEKVPLFLMHSSSFISGIAFATYFSWRLALVAFPTLVLLIIPGMIYGKYLIYLSKSSAKEYGKANAIVEQALSSIKTIYSFTAERRILVRYSEILERTSRLGIKQGIAKGLAVGSTGLCFAIWAFLAWYGSHLVMYKAESGGRIYAAGICFIMSGQSLGVVLPDLKYLTEASVASTRIFNMIDRKAVIDGEDTTKGIVLDQINGNLDFEHVKFTYRSRPDNLVLNDFNLRVESGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKSLQLKWLRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEVVAAATAANAHNFVRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDHASLGRTTLVVAHKLSTVRNADVIAVVNGGCIIEIGTHNELITRPNGHYAKLAKLQTQLSFDDQQEISNALSSAARSSAGRTSTARSTSPAMFQKSPIPIDDNTITPESSLVSHPSPSFPRLLSLNAPEWKQGLIGTFSAIAFGSVQPIYALTIGGMISAFFAESHSEMIHRIRTYSLIFTSLSLASITLNLLQHYNFAYMGAKLTKRIRQRMLENILTFETAWFDEEHNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFEILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPVLRKFCLEVKAXXGCGKSTVIALIQRFYDVERGFVKVDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN | 1234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g03297 | 1234 | Gene3D | ABC transporter type 1, transmembrane domain | 899 | 991 | IPR036640 | GO:0005524|GO:0016021 | |
Aip05g03297 | 1234 | Gene3D | - | 992 | 1231 | IPR027417 | - | |
Aip05g03297 | 1234 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 33 | 334 | - | - | |
Aip05g03297 | 1234 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 362 | 598 | IPR003439 | GO:0005524 | |
Aip05g03297 | 1234 | SUPERFAMILY | ABC transporter transmembrane region | 664 | 979 | IPR036640 | GO:0005524|GO:0016021 | |
Aip05g03297 | 1234 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 667 | 983 | - | - | |
Aip05g03297 | 1234 | ProSitePatterns | ABC transporters family signature. | 1133 | 1147 | IPR017871 | GO:0005524 | |
Aip05g03297 | 1234 | Gene3D | - | 353 | 613 | IPR027417 | - | |
Aip05g03297 | 1234 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 678 | 965 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip05g03297 | 1234 | Pfam | ABC transporter transmembrane region | 678 | 948 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip05g03297 | 1234 | Pfam | ABC transporter transmembrane region | 38 | 296 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip05g03297 | 1234 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 34 | 326 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip05g03297 | 1234 | SMART | AAA_5 | 1021 | 1213 | IPR003593 | - | |
Aip05g03297 | 1234 | SMART | AAA_5 | 389 | 590 | IPR003593 | - | |
Aip05g03297 | 1234 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1002 | 1230 | IPR003439 | GO:0005524 | |
Aip05g03297 | 1234 | CDD | ABC_MTABC3_MDL1_MDL2 | 363 | 600 | - | - | |
Aip05g03297 | 1234 | Pfam | ABC transporter | 1032 | 1161 | IPR003439 | GO:0005524 | |
Aip05g03297 | 1234 | ProSitePatterns | ABC transporters family signature. | 501 | 515 | IPR017871 | GO:0005524 | |
Aip05g03297 | 1234 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 353 | 600 | IPR027417 | - | |
Aip05g03297 | 1234 | SUPERFAMILY | ABC transporter transmembrane region | 21 | 341 | IPR036640 | GO:0005524|GO:0016021 | |
Aip05g03297 | 1234 | Pfam | ABC transporter | 380 | 529 | IPR003439 | GO:0005524 | |
Aip05g03297 | 1234 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 992 | 1231 | IPR027417 | - | |
Aip05g03297 | 1234 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 8-RELATED | 19 | 1231 | - | - | |
Aip05g03297 | 1234 | Gene3D | ABC transporter type 1, transmembrane domain | 8 | 340 | IPR036640 | GO:0005524|GO:0016021 | |
Aip05g03297 | 1234 | Gene3D | ABC transporter type 1, transmembrane domain | 614 | 898 | IPR036640 | GO:0005524|GO:0016021 | |
Aip05g03297 | 1234 | MobiDBLite | consensus disorder prediction | 616 | 643 | - | - | |
Aip05g03297 | 1234 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 19 | 1231 | IPR039421 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g03297 | Aip-Chr5 | 138571224 | 138578828 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g03297 | 34 | 620 | Calmodulin-binding Proteins | AT2G36910 | 34.746 | 1.14e-100 | 347 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g03297 | K05658 | - | gmx:100801088 | 2004.18 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip05g03297 | 05 | 138571224 | 138578828 | Aip05g03297 | 05 | 138571224 | 138578828 | ECH |