Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03275 ATGCAGAGGGCAACTGGGGACACAAAAAGCATGGAGAAGAGGTCACTTGAGGGTGGAGAAGATGACCAGCTTGAACGAAAGATGCCTTTTCTTGCCAGTTTGTGGCTCTATCCATCAATGGATACGCATAAGAGAGGGAAGAACTTCATGGAAACCAGCATTAACAAATCTAAGGAGCTTTTGAAAAGCATGGACTGTGGCCATGTTTCAGATATCAGTATGACAGAAGTTAACAAAGATCTTGTGGCATCAATTAAGGAAAAACTCGAAGTGATTTCATCTTTGAAATCCATCTTCAGGATCCTTGTGAAGCTTCTACAAGCAAACCCGAAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGCATTCCTTTCTTCCTCTTTCACACCCTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGAGATTGGGATTCTAGCTGATGGCACCTTGGCTCTGAGACAAGTTCTAATTCAGGTTCCAGGTATTGTATTTGCAAGAGGACCTGCTGTGACTGTGTTGATACTTCTGGAATCAGAAGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTCGTTGA 843 0.4294 MQRATGDTKSMEKRSLEGGEDDQLERKMPFLASLWLYPSMDTHKRGKNFMETSINKSKELLKSMDCGHVSDISMTEVNKDLVASIKEKLEVISSLKSIFRILVKLLQANPKVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKGEICAFLSSSFTPCRNAIDSSLFKQWLHNLQSEIGILADGTLALRQVLIQVPGIVFARGPAVTVLILLESEGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGTAVR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03275 280 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 111 141 IPR016162 GO:0016491
Aip05g03275 280 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 142 180 IPR016163 GO:0016620
Aip05g03275 280 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 175 219 - -
Aip05g03275 280 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 219 280 - -
Aip05g03275 280 Pfam Aldehyde dehydrogenase family 111 177 IPR015590 GO:0016491
Aip05g03275 280 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 175 219 - -
Aip05g03275 280 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 219 280 - -
Aip05g03275 280 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 205 280 - -
Aip05g03275 280 SUPERFAMILY ALDH-like 109 178 IPR016161 GO:0016491
Aip05g03275 280 SUPERFAMILY Nudix 223 280 IPR015797 -
Aip05g03275 280 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03275 Aip-Chr5 138153307 138157415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03275 111 180 Aldehyde Dehydrogenase Gene Family AT3G24503 75.714 1.81e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03275 K18447 - adu:107484093 159.844