Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03270 ATGGGCTGCATCTACTCTCGTGTTTGCATCGGCGACAACTGCGTCGGAGGTGCCGCCGCCGCCTCCAGCATCAACGGCGACGCAATCGCTCGTCCTCCGCGCGGGACCTCATCCTCCGAGCCAGACGAATCCTCCGCCGCCGCCGCCGCCTCGCCGGACGGCGACTTCCAGGTGCTGAATCAGCTCAGCTTGACGCGGGACCCGGAGGCCGGAATCCGGAGGCTCGCTAGGGTTTCGTCACAGTTCCTTCCACCGGAAGGTTGTAAAGTGGCGAAGGTTCCTGCGTTCAGCTACGAGCTTCGGTACTCGTTCTTGTCACAGAGAGGTTACTATCCTGACGCACTGGACAAGGCGAACCAGGACAGCTTCTGTATCCACACACCGTTTGGTTCGAGTCCGAATGACCATTTCTTCGGTGTCTTCGACGGCCACGGCGAGTTCGGTGCGCAGTGTTCACAGTTTGTCAAGCAGAAGCTCTGTGAGAATCTTCTTCGAAGTGCGAAATTCCAAAACGATGCCGTTGAGGCTTGTCACGGTGCTTTTCTGGCCACGAATTTGCAGCTTCACAATGATGTCTTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGAGGGAGAACTATAATTGTGGCGAATTCAGGCGATTCGAGGGCGGTGATTGGAGAGAGGAGAGGGAAGGATCTTGTGGCCGTTGATTTGTCGTTGGATCAGACTCCGTTTAGGGCTGATGAGCTGGAGAGAGTGAAGATGTGTGGTGCCAGGGTTTTGACACTGGATCAAATTGAGGGTTTGAAGAATCCTGAAGTTCAGTGTTGGGGAAATGAAGAAGGTGATGATGATGGGGACCCACCGAGGTTGTGGGTCCCCAATGGGATGTACCCTGGGACTGCATTCACAAGGAGCATTGGGGATTCAATTGCCGAGACTATTGGTGTTGTTGCTAACCCTGAGATTGTTGTCTTCGAGCTCACCAAGGATCATCCTTTCTTCGTGCTTGCAAGTGATGGTGTCTTTGAATTCATCTCTAGCCAAACGGTAGTTGATATGGTTGCAAAGTTCAAAGATCCGCGTGATGCTTGTGCTGCAATAGTAGCTGAATCTTATCGGCTTTGGCTACAGTATGAAACTCGTACGGATGATATCACAATCATCATTGTGCATATAAATGGGCTAACTGAACCTGGTGTTGGTCAGGAAAAAACATTTGGCGAATCTTTACGAACTCCAGTGCCTCAAGTTGTAGAGATGACAGGTTCAGAATCTCCCTCTACCCTGGGTTGGAACTCTAGGAACCAACGGGTAAGGCATGACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTGGAGAATGGGCAAGCTTGGGTTGCTCCATCTTCAGCGCATAGGAAGACATGGGAGGAAGAAGCACAGATAGAGCGAGCACTGCATGATCATTTTCTCTTCCGAAAACTTACTGCTTCTCAATGTAATGTTCTATTGGATTCCATGGAAAGAGTTGAGGTGCAACCTGGTGATATTATAGTCAAACAGGGCAGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAAGTAACCAAGGTTTTACAGCGTTACACATCGGAAAAACTATCATGCTTTGGAGAGCTTGCTCTAATGTACAATAAACCACTCCAGGCTTCTGTACGTGCTGTAACTAAAGGGACTCTTTGGGCTTTAAAGCGAGAAGATTTTCGAGGCATTCTAATGTCAGAATTCTCGAATTTGTCATCCTTGAAGTTGCTACGATCTGTAGATCTCCTGTCAAGATTGTCAATTTTACAACTGAGTCAGATTTCTGACTCCCTCTCTGAAGTCTTCTACGCAAGTGGGCAGACAATAATTGATCGTAGTGAAGTCCATGGATTGTACATAATCCAGAAGGGACAAGTGAAAATCACTTTTGATGCGGATTTATTGATGAATCCAAATGTTTGCAGCCTCGAGCCTGATTTGGAAAATGTGAATGATAATGCACAGAGCAGAATAGAATTGTCAATAGAGAAGCAAGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAAAAGGTTGGTCCCTTAAGTGCTGTTGCTGTGGGTGACGTTGTATGTGCTATATTAACAAAAGAGAAATTTGAATCTGTTGTTGGCTCCATACAAAAGATTTCTCAGGAGGATCGCAAGTCAAGACATAATTCCAAAGAGTTGGCTAGAAATTTTGACTTTTCATCCCTAGGAAAAGAATGGATAAAGAGTGTCTATTCTACTGACTGCTCTGATATTGGGCTTGTAAAGTTTGGAGAAGCAGCAGAAAATTTGCTTACATTGAAGAGATTTTCCAAGCCAAAAGTGAAAAGGCTGGGAAAAGAAGCACAAGTCTTGAAAGAGAAAGATTTGATGAAGGGTGTGAGCTCTTCAGCATGTATACCACAGGTTTTATGCACTTCTGCCGACAGCATATATGCTGGAATAGTGTTAAATACACTCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTGGTGAATCGGCCGCACAGTTTTGTGCTGCATCTGTTGTTATTGCTTTAGAAGATCTGCACAAGAATGGTGTTCTCTACAGAGGAGTCTCGCCTGATGTTGTGATGTTGGACCAAACAGGACATATACAGCTGGTTGACTTTAGATTTGGTAAGAAGCTCGCCAGTGAAAGAACATTCACAATTTGTGGGATGGCAGATTCACTAGCTCCAGAGATTGTGTTGGGAAAAGGCCACAGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTCTGATATATTTTATGCTACGAAGTGAAATGCCATTTGGATCATGGAGGGAAAATGAACTTGATACAGTTGCCAAAATTGCAAAGCGGAAGCTACATCTTCCAGATACATTCAACCCCGACGCTGTTGATATCATATCCAAGTTACTTGATGTGGAAGAAACTACTAGACTTGGTAGCCAAGGTACTGATTCTGTCAAGAGTCACCCATGGTTTAATGGTGTTGAATGGGAAGGGATTCGCCACCGCACTTTTCCCGCTCCTCCGGAAATCGTTTCTCGTGTTACACAATACCTGGAAGTTCATTCTGAGGATTGCAGTGGTTCTCTAGGTTCCCCATTACAGGAGGTAGAAGAACTCAATGTGCCTGAATGGCTTGAGGACTGGTAA 3237 0.4656 MGCIYSRVCIGDNCVGGAAAASSINGDAIARPPRGTSSSEPDESSAAAAASPDGDFQVLNQLSLTRDPEAGIRRLARVSSQFLPPEGCKVAKVPAFSYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGSSPNDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRSAKFQNDAVEACHGAFLATNLQLHNDVLDDSMSGTTAITVLVRGRTIIVANSGDSRAVIGERRGKDLVAVDLSLDQTPFRADELERVKMCGARVLTLDQIEGLKNPEVQCWGNEEGDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTKDHPFFVLASDGVFEFISSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIIVHINGLTEPGVGQEKTFGESLRTPVPQVVEMTGSESPSTLGWNSRNQRVRHDLSRARLRAIENSLENGQAWVAPSSAHRKTWEEEAQIERALHDHFLFRKLTASQCNVLLDSMERVEVQPGDIIVKQGSEGDCFYVVGSGEFEVLATQEEKDGEVTKVLQRYTSEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVFYASGQTIIDRSEVHGLYIIQKGQVKITFDADLLMNPNVCSLEPDLENVNDNAQSRIELSIEKQEGSYFGEWALLGEKVGPLSAVAVGDVVCAILTKEKFESVVGSIQKISQEDRKSRHNSKELARNFDFSSLGKEWIKSVYSTDCSDIGLVKFGEAAENLLTLKRFSKPKVKRLGKEAQVLKEKDLMKGVSSSACIPQVLCTSADSIYAGIVLNTLLACPLSSILSSPFGESAAQFCAASVVIALEDLHKNGVLYRGVSPDVVMLDQTGHIQLVDFRFGKKLASERTFTICGMADSLAPEIVLGKGHSFPADWWALGVLIYFMLRSEMPFGSWRENELDTVAKIAKRKLHLPDTFNPDAVDIISKLLDVEETTRLGSQGTDSVKSHPWFNGVEWEGIRHRTFPAPPEIVSRVTQYLEVHSEDCSGSLGSPLQEVEELNVPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03270 1078 SUPERFAMILY cAMP-binding domain-like 451 596 IPR018490 -
Aip05g03270 1078 Pfam Cyclic nucleotide-binding domain 631 735 IPR000595 -
Aip05g03270 1078 Pfam Cyclic nucleotide-binding domain 505 596 IPR000595 -
Aip05g03270 1078 PRINTS cAMP-dependent protein kinase signature 557 566 - -
Aip05g03270 1078 PRINTS cAMP-dependent protein kinase signature 522 536 - -
Aip05g03270 1078 PRINTS cAMP-dependent protein kinase signature 507 521 - -
Aip05g03270 1078 PRINTS cAMP-dependent protein kinase signature 731 743 - -
Aip05g03270 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 486 595 IPR000595 -
Aip05g03270 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Aip05g03270 1078 MobiDBLite consensus disorder prediction 26 51 - -
Aip05g03270 1078 Gene3D - 96 393 IPR036457 -
Aip05g03270 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 42 1078 - -
Aip05g03270 1078 Gene3D Jelly Rolls 458 600 IPR014710 -
Aip05g03270 1078 Gene3D Jelly Rolls 601 755 IPR014710 -
Aip05g03270 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 612 736 IPR000595 -
Aip05g03270 1078 ProSiteProfiles PPM-type phosphatase domain profile. 101 392 IPR001932 -
Aip05g03270 1078 ProSiteProfiles Protein kinase domain profile. 758 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03270 1078 SMART cnmp_10 612 750 IPR000595 -
Aip05g03270 1078 SMART cnmp_10 486 609 IPR000595 -
Aip05g03270 1078 SUPERFAMILY PP2C-like 86 394 IPR036457 -
Aip05g03270 1078 Pfam Protein kinase domain 791 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03270 1078 SMART serkin_6 707 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03270 1078 Pfam Protein phosphatase 2C 127 371 IPR001932 -
Aip05g03270 1078 Gene3D Phosphorylase Kinase; domain 1 788 851 - -
Aip05g03270 1078 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 42 1078 - -
Aip05g03270 1078 SUPERFAMILY cAMP-binding domain-like 604 739 IPR018490 -
Aip05g03270 1078 SUPERFAMILY Protein kinase-like (PK-like) 794 1049 IPR011009 -
Aip05g03270 1078 SMART PP2C_4 102 390 IPR001932 -
Aip05g03270 1078 CDD CAP_ED 486 595 IPR000595 -
Aip05g03270 1078 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Aip05g03270 1078 CDD CAP_ED 612 736 IPR000595 -
Aip05g03270 1078 CDD PP2Cc 117 392 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03270 Aip-Chr5 138085636 138092850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03270 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 66.546 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Aip05g03270 PP2C 2.3e-34 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03270 - - adu:107490298 2050.02