Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03265 ATGCCGATGCAGGAAGAGGAGCGAGTATTGGAGATCAACTTGATCTCCGCACAGGGACTCCAACCACCTTCTTCTCCGCTTCGGAAGCTCCAAACCTACGCTCTCACGTGGATCGATCCCTCAACCAAGCTACGAACCAGACTCGATAGTCTTGGCGGTCAAAACCCTACTTGGAACGACAAGTTCCTCTTCCGCGTCACGCCGGAGTTTCTCTCCGGCGACACTTCCGCCGTCTCTGTTGCCATTTACGCCGTTGGAACATTCCGCGATCACCTCATCGGCACCGTCACTTTCTTCATCGGGAACGTCCTCTCTGGCGGCGCCGGAGTGCCTTGCTTCAGCGCGTTTCAGATTCGCCGTCCCTCCGGGATGTTCCACGGCGTCATGAACATCGGAGCCATGGTCGCCGACGTCTCCGATTTTCCGGCGCTGCATAAGATATCGGCGATAGGGTACAGAGACCTGATGGGGATGAAGATGAAGGAGCAGAGGAAGAAAAAGAAGAATAAGAAGGCGCCGGAGGAGGAACTTTCGAGCGATTCTTGCGAGAATTCTTGTGCGGATTCGGTGGAGGAGGCGGATTCATCCTCATCTTCGTCGTCGCTGTCTCCGAGTGCGACGGGGGCTGGGGCGGTGTTGAAGGAGTGGAACGGGGTGAGGGAATTGGCAGGAAACAAAGGACTTGCCGCTTCTGGATTCTTGTGCTGCTTCATGGTTGCCCCCAGAACTGTTCCAGAGCACCATAGTTTTTGCACGAAACCAAGGAGGTTATTGAGGAAAGATGGTAACTCAATGCGAGAGATTGCATCTGAGGACTTGTCTCAAGGTAGTGCCACAGAGGAAAACGTGATGGATTGGGTCAAGCATGACAACCGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGAAAGGACCATAAAATTTTATACAGAGTGCTTGGGGATGTCGGTTCTCAGAATTCGCGACTTGCCGGAGCTTAGATGTGCTAATGCCTTTCTTGGCTATGGACCTGAAGATGAAAGCTTTGTTATTGAACTGACATACAATTATGGGATTGATGAGTATGACATTGGAAATGGATTTGGCCATTTTGGTGTTTCTTTTGGTGATATTTCAAGCATAGTGGACATTGTAAGAGATAATAAGGATGGAAAAATAATTAGAGAGCCCGGTCCTGTCGAAGGAGGATGCTCCATAATTGCATTCATTGAAGATCCTGATGGTTATAAATTTGAACTTCTAGAAAGGGTTCTCTCTCATGAACCTTTATGCCGAGTAATGCTTCGAGTGGGTGATCTTAATCGATCCATCGAATTTTATGAGAAGGCTTGTGGTATGCAGCTACTTTATACACGAGATAATCCAGAATGCCAGTATACCATAGCGATCATGGGTTATGGCCCAGAAGATGAAAATGCTGTTCTGGAGTTGACATACAACTACGGAGTCACAGAATATGATAAAGGAGATGGTTATGCCCAGATTGCAATAGGCACAGATGATGTGTACAGAACTGCAGAAGCAATCAAACTTGCTGGTGGAAAGATCACCCGGGAACCTGGACCGGTACCTGGCATCGGAACAAAAATAACTGCATGCTTGGACCCTGATGGTTGGAAAACGGTTTTTGTGGATAATGTCGATTTCCTTAGGGAGTTGGAGTAA 1671 0.4835 MPMQEEERVLEINLISAQGLQPPSSPLRKLQTYALTWIDPSTKLRTRLDSLGGQNPTWNDKFLFRVTPEFLSGDTSAVSVAIYAVGTFRDHLIGTVTFFIGNVLSGGAGVPCFSAFQIRRPSGMFHGVMNIGAMVADVSDFPALHKISAIGYRDLMGMKMKEQRKKKKNKKAPEEELSSDSCENSCADSVEEADSSSSSSSLSPSATGAGAVLKEWNGVRELAGNKGLAASGFLCCFMVAPRTVPEHHSFCTKPRRLLRKDGNSMREIASEDLSQGSATEENVMDWVKHDNRRMLHVVYRVGDLERTIKFYTECLGMSVLRIRDLPELRCANAFLGYGPEDESFVIELTYNYGIDEYDIGNGFGHFGVSFGDISSIVDIVRDNKDGKIIREPGPVEGGCSIIAFIEDPDGYKFELLERVLSHEPLCRVMLRVGDLNRSIEFYEKACGMQLLYTRDNPECQYTIAIMGYGPEDENAVLELTYNYGVTEYDKGDGYAQIAIGTDDVYRTAEAIKLAGGKITREPGPVPGIGTKITACLDPDGWKTVFVDNVDFLRELE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03265 556 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 424 548 IPR037523 -
Aip05g03265 556 Pfam C2 domain 10 106 IPR000008 -
Aip05g03265 556 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 292 418 IPR029068 -
Aip05g03265 556 Gene3D - 421 556 IPR029068 -
Aip05g03265 556 MobiDBLite consensus disorder prediction 161 205 - -
Aip05g03265 556 Gene3D C2 domain 1 119 IPR035892 -
Aip05g03265 556 Gene3D - 265 418 IPR029068 -
Aip05g03265 556 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 293 418 IPR037523 -
Aip05g03265 556 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 240 556 - -
Aip05g03265 556 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Aip05g03265 556 PANTHER LACTOYLGLUTATHIONE LYASE 240 556 - -
Aip05g03265 556 TIGRFAM glyox_I: lactoylglutathione lyase 425 548 IPR004361 GO:0004462|GO:0046872
Aip05g03265 556 TIGRFAM glyox_I: lactoylglutathione lyase 281 426 IPR004361 GO:0004462|GO:0046872
Aip05g03265 556 MobiDBLite consensus disorder prediction 179 205 - -
Aip05g03265 556 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 428 542 IPR004360 -
Aip05g03265 556 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 294 415 IPR004360 -
Aip05g03265 556 ProSitePatterns Glyoxalase I signature 2. 360 372 IPR018146 GO:0004462|GO:0046872
Aip05g03265 556 ProSitePatterns Glyoxalase I signature 1. 296 317 IPR018146 GO:0004462|GO:0046872
Aip05g03265 556 SMART C2_3c 9 112 IPR000008 -
Aip05g03265 556 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 425 548 IPR029068 -
Aip05g03265 556 CDD C2_SRC2_like 10 131 IPR044750 GO:0006952
Aip05g03265 556 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03265 Aip-Chr5 138010496 138014251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03265 425 545 Calmodulin-binding Proteins AT1G08110 25.850 1.50e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03265 K01759 - gmx:100775714 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03265 05 138010496 138014251 Aip05g03265 05 138010496 138014251 ECH
Aip03g02239 03 34483362 34484884 Aip05g03265 05 138010496 138014251 PCT