Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03259 ATGGAACGCATCATCGCCTCCAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGTTCCTTCGGCGAAATCTACCTAGCTACGCATGTTGATACCTTCGAGATCGTCGCCGTCAAGATCGAGAACACTAAAACGAAGCATCCTCAATTGCTTTATGAGGCCAAGCTTTACAACATTCTCCAAGGAGGAAGTGGCATTCCTAGCATAAGATGGTCTGGTGTAGATGGGGAGGATAATGTTCTTGTGATGGATTTGCTGGGGCCTAGTCTTGAGGATCCCTTTGTGTATTGTGGAAGAAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATACGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCTACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACGGGGACTGCACGCTATGCAAGTTGCAATACACATCTTGGGATTGAGCAAAGTCGGCGGGATGATTTGGAGTCATTGGGATATGTGCTTCTCTACTTTCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGACAAAATATGTGAGAAGAAAGTGTCAACCCCTATTGAGGTTCTTTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTGACCTTCGATCAGCGACCTGACTATGGATTCTTGAAGCGCCTATTTCGGGAACAATTTGCTCGGGAAGGGTATGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGGCTCACTCATCTGTGGTCCCAGGAGCAAGCAACAGTCGTGCAACACCAATGGACGATGACAACCATCGAGGTGATGCTACAGAGCACATTAAATCAGGCAATGCCACTGGCTCTGGTGTTAAATTTCAGTTTAAGTCACCTGCTGTTAAAAATCCACTCGACAAGAACGACAAGAATATTTTTGGCGAAGCAAATATACCCTCTACTTCCCATTCTCATGCTGGTCCCTCAAAAAGGAACTCCTTGAAGCCTGCTCCGTCCTCCGATGCTGTTAACCCTGGCCTTGGGCAAGGCAGTAAAGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGCATCGCATATCATCTGCCAAATGA 1269 0.4507 MERIIASKYKLGRKIGSGSFGEIYLATHVDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVMDLLGPSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFREQFAREGYEFDYVFDWTILKYQQAQKNRVQAHSSVVPGASNSRATPMDDDNHRGDATEHIKSGNATGSGVKFQFKSPAVKNPLDKNDKNIFGEANIPSTSHSHAGPSKRNSLKPAPSSDAVNPGLGQGSKVGPSSSWISSLHRISSAK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03259 422 PANTHER CASEIN KINASE-RELATED 1 403 - -
Aip05g03259 422 MobiDBLite consensus disorder prediction 366 422 - -
Aip05g03259 422 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03259 422 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03259 422 MobiDBLite consensus disorder prediction 304 422 - -
Aip05g03259 422 MobiDBLite consensus disorder prediction 304 319 - -
Aip05g03259 422 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Aip05g03259 422 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aip05g03259 422 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 403 - -
Aip05g03259 422 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Aip05g03259 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aip05g03259 422 CDD STKc_CK1_delta_epsilon 8 282 - -
Aip05g03259 422 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03259 Aip-Chr5 137938807 137942887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03259 9 215 EF-hand Containing Proteins AT4G23650 29.577 2.32e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip05g03259 Pkinase 1.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03259 K08960 - gmx:100805890 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03259 05 137938807 137942887 Aip05g03259 05 137938807 137942887 ECH