Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03251 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCTCCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCTTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCAACATCATCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAATAATAGTGATCATAAGACTAATAATATTGATGCAAGGCATCCACCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGCAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACATTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTGTTCATCAGGGAGAGAAAAATTGTTTATTCCCTGAAGACCCCGGTCAGCTGCTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTCAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAATGGTGCTGATTATTGGGCTCCAGCCCTTGGTGGCGGTTTTCGGTAG 1053 0.4435 MNRGVVHGSPVQQMMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHQHHHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNNIDARHPPPPPPDRSSECNSSASGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSVHQGEKNCLFPEDPGQLLHENCLKRKAPTSEQDSQEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03251 350 Gene3D - 205 262 IPR036638 GO:0046983
Aip05g03251 350 PANTHER OS05G0228400 PROTEIN 17 336 - -
Aip05g03251 350 MobiDBLite consensus disorder prediction 156 209 - -
Aip05g03251 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
Aip05g03251 350 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 336 - -
Aip05g03251 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 261 IPR036638 GO:0046983
Aip05g03251 350 MobiDBLite consensus disorder prediction 40 69 - -
Aip05g03251 350 MobiDBLite consensus disorder prediction 34 69 - -
Aip05g03251 350 CDD bHLH_AtbHLH_like 208 257 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03251 Aip-Chr5 137748781 137752463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03251 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.067 3.87e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03251 - - gmx:100786555 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03251 05 137748781 137752463 Aip05g03251 05 137748781 137752463 ECH
Aip03g02275 03 35185632 35189624 Aip05g03251 05 137748781 137752463 PCT