Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03241 ATGGGGGAAGGTGAAGGAGGAGGGGTTGATGGCGGTTCAAAGACTGCAACGTCATCGGTGGATGCTGCTGTAACGACGCCGGTGGAGGCTCCTACGGGGAAGAAACTCGCCCGACAGCTCGATTTTACGGCCTTGCCGGAGAAAAAATCGCAACAACAATTGCAACAACGATTGCATTCTCAGGTTCAGGTGCAGCAGCAGAAGCAGATTGTGGCTCCGGTGATAGCGGCGCAGCCGCAGATTATGGCACAGCCGTCGGTGGTTGTAAAGCCGGTTCCTTCGCCGCAGGCACCTGCAGTGAAAGTGGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGATATAAAGGAAGCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGTTTAAAGCTATATTGCGAATGTTTTGCATCGGGAATATATTGCGACGGTTGCAATTGTGTAAATTGTTTCAACAATGTTGAAAATGAGGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCAAGCAGCCCCCATGGAACCCGTGATAGCAGGGAGGAAGCTGGTGAAGTTTTAATATTAGGAAAGCATAACAAGGGTTGCCACTGTAAGAAATCAGGGTGTCTCAAGAAGTACTGTGAGTGTTTCCAAGCCAACATCCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGCGAAGAGAGACAGGCCTTGTTTCATGGAGATCAAAATAACATGACATATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCAATTGGTACATCTGGTTATTCATCACCTCCGGTATCCAAGAAAAGAAAAGGCCAGGAAATCTTCGTTGGGCAAACAGCCAAGGAACCATCTGTTAGCAAGTTGGGACAACAGGTAAACCATGTCCGAAGTCCAGCTCCATCCCCATCCTTGCCCTCCCTTCCGGGCACTCGTGTTGGAACTGCAACACTTGGTCCTTCAAAATTTTCATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAAGAGCTTTGCTCAGTTTTGGTGCTGCTATCTGGACAAGCTGCAAAGACACTTACAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACAGAAACTTCACTTGCTTCTTCAAATCAGTCACAATTACCAAATCAAAAGGAAGGTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGCGCAAACCAAGCAGATAAAATCAGCCCGGACAATTCAAGTTCAGATGGTGCTGACATCCCGAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACGTTCATGACAGCTGCCTCTCCAGTTGGCACAATGGCTCATGGCTGCAACACATCCTCGGAATTTCCTTACGGACAAGGAATGACAGAGGTCTACGCCGAGCAAGAAAGGATTGTCTTAACAAAGTTTAGAGATTTCCTCAACAGAGTTATCACCATGGGAGAAATAAATGAAACAAAGTGTTCGTCGTTAGCTAGAAGTGAATTGGAGAGCCAGAAGGATCCAATCAATAACGGCACTGGAAATATGACTACCGAGAGTTTGCATCAGCAGGGTGCCACTAGCAATGGTGTTGCCAAATCGATTGTTCCACCTACGGCCGCAGCAGCTTCGGCTTCACCAGTCCCCGGTCATAATAATGTTCCTGAAAATGGAGAAAATAAGATGAAGACTGAAAAATAG 1788 0.4564 MGEGEGGGVDGGSKTATSSVDAAVTTPVEAPTGKKLARQLDFTALPEKKSQQQLQQRLHSQVQVQQQKQIVAPVIAAQPQIMAQPSVVVKPVPSPQAPAVKVGKPESPKSRSRPNFDIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNMTYIQQAANAAITGAIGTSGYSSPPVSKKRKGQEIFVGQTAKEPSVSKLGQQVNHVRSPAPSPSLPSLPGTRVGTATLGPSKFSYRSLLADIIQPQHLKELCSVLVLLSGQAAKTLTDQKNLMEKHTEDQTETSLASSNQSQLPNQKEGDVEKAMADDCSSANQADKISPDNSSSDGADIPKGRPMSPGTLALMCDEQDTFMTAASPVGTMAHGCNTSSEFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPINNGTGNMTTESLHQQGATSNGVAKSIVPPTAAAASASPVPGHNNVPENGENKMKTEK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03241 595 PANTHER TESMIN/TSO1-RELATED 34 574 IPR028307 -
Aip05g03241 595 ProSiteProfiles CRC domain profile. 125 249 IPR005172 -
Aip05g03241 595 MobiDBLite consensus disorder prediction 532 595 - -
Aip05g03241 595 MobiDBLite consensus disorder prediction 425 439 - -
Aip05g03241 595 MobiDBLite consensus disorder prediction 532 563 - -
Aip05g03241 595 MobiDBLite consensus disorder prediction 386 452 - -
Aip05g03241 595 MobiDBLite consensus disorder prediction 395 410 - -
Aip05g03241 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 212 246 IPR005172 -
Aip05g03241 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 126 161 IPR005172 -
Aip05g03241 595 MobiDBLite consensus disorder prediction 92 117 - -
Aip05g03241 595 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 34 574 - -
Aip05g03241 595 SMART CXC_2 124 164 IPR033467 -
Aip05g03241 595 SMART CXC_2 209 250 IPR033467 -
Aip05g03241 595 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03241 Aip-Chr5 137456514 137464230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03241 34 568 CPP Transcription Factor Family AT4G29000 54.770 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip05g03241 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03241 - - gmx:100777698 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03241 05 137456514 137464230 Aip05g03241 05 137456514 137464230 ECH