Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03230 ATGTCGTATACGTTTCTTGCGAGTCATGGTGTTCTTGACGGTGTCGTGGTTGCCGCTAAGGCTGGGCGGTCTCCTACCTCGGCCGCCGCTGCCGCCTCTCCAGCTACCTCACCGCCCTCTACTAAAGCCTCCTCTCCATCTGCCGCAACTTCCTCAACGGCCTCCGCCCCTCCGTCTACCTCACCGGCCTCCACCTCGACTCCCACAACGGCCTCCACCGCTGCTTCCACAACGGCCGCCGCCCCTCCTACCTCACCGTCCACCGCCCCTCCTCCCTCATCGGCCGCCGCCTCTACTCCCTCATCGACCGCGACCTCTCCGCCGTCTCGTAGCTCTCCTTCTCCCCCATCTTCCGGCGGCAAAACAACACCTTCGTCCAAGTCACCGTCGTCGTCGTCGTCCCCATCTCCACCGTCGTCGTCTTCTTCTTCAGGCATTTCCACGGGAGTTGTGGTCGGAATCGCCGTTGGTGCTGTGGCAGTTCTTGTGGTACTGAGCGTTCTTTGCATATGCTGTAGGAAGAAGAAGAGAAGACGCGACGAGGAGCAATATTACGGTTACCCACCACCCCAGCCGCCACCACGTGGACCCAAAGATGACTATGGTGGTCCCCCACGCCAGTGGCAGCACAATGCTCCACCTCCTTCAGATCACGTGGTCTCAGTCCAGCCACCTAAGCCATCGCCTCCGCCTCCGCCTGCGTACCAAGCTCCACCACCACCTCCACCTTTCATGAGCAGCAGTGGCGGTTCTGGATCAAACTATTCAGGTGGTGAGCCACTTCCACCTCCTTCTCCAGGCATAGCATTAGGCTTCTCAAAGAGCACTTTCACATATGAGGAGCTGGCGCGAGCAACCGATGGCTTCTCGGACGCCAACCTCCTCGGATCAGGTGGATTCGGGTATGTGCACAGAGGAATTCTTCCCAACGGCAAGGAAGTGGCGGTGAAGCAGCTAAAGGCTGGAAGCGGGCAAGGAGAGCGTGAATTCCAAGCTGAAGTAGAGATAATTAGTCGTGTTCATCACAAACACCTTGTTTCTTTGGTTGGATACTGCATCACCGGGACCCAGAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACGTTGGAATTCCATTTACACGGGAGAGGGCGACCTACGATGGATTGGCCCACAAGACTACGAATTGCCTTAGGATCTGCTAAAGGGCTGTCATATCTTCATGAAGATTGTCATCCTAAGATCATTCATCGCGATATCAAATCTGCTAACATTCTTCTCGATTTTAAGTTTGAAGCTAAGGTTGCTGATTTCGGGCTTGCAAAGTTCTCTTCTGATGTCAACACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCGGAATATGCTTCCAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTTCTCGAGTTAATTACTGGAAGAAGGCCAGTTGATAAAACCCAAACTTTCATGGAGGATAGTTTGGTAGACTGGGCTAGGCCTTTGCTCAACCGAGCATTGGATGAAGATGATTATGACTCTCTAGTTGACCCAAGGCTCCAGAATGAATATGATCCCAATGAGATGGCTCGCATGGTGGCATGTGCCGCTGCTTGCACGCGTCATTCAGCAAAGCGTCGACCAAGGATGAGCCAGGTTGTTCGTGCTCTTGAAGGAGACGTGTCTCTGGCGGATCTTAATGAAGGAATTAAACCTGGACACAGCACCATGTACAGTTCACATGAAAGCTCGGATTATGACACTGCACAGTACAAGGAAGACATGAGAAGGTTCAGGAAAATGGCATTGGGAACCCAGGAGTACGCCAGCAGCGAGTATAGCGCGCCTACAAGCGAGTACGGCCTGTATCCATCCGGCTCAAGCAGTGAAGCGCAGAGCCGCCAGACCACCCGCGAAATGGAAATGCGGAAGATGAAGAACAGTCAAGGTTTCAGCGGAACTTCTTGA 1983 0.5335 MSYTFLASHGVLDGVVVAAKAGRSPTSAAAAASPATSPPSTKASSPSAATSSTASAPPSTSPASTSTPTTASTAASTTAAAPPTSPSTAPPPSSAAASTPSSTATSPPSRSSPSPPSSGGKTTPSSKSPSSSSSPSPPSSSSSSGISTGVVVGIAVGAVAVLVVLSVLCICCRKKKRRRDEEQYYGYPPPQPPPRGPKDDYGGPPRQWQHNAPPPSDHVVSVQPPKPSPPPPPAYQAPPPPPPFMSSSGGSGSNYSGGEPLPPPSPGIALGFSKSTFTYEELARATDGFSDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGRGRPTMDWPTRLRIALGSAKGLSYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKTQTFMEDSLVDWARPLLNRALDEDDYDSLVDPRLQNEYDPNEMARMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSTMYSSHESSDYDTAQYKEDMRRFRKMALGTQEYASSEYSAPTSEYGLYPSGSSSEAQSRQTTREMEMRKMKNSQGFSGTS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03230 660 ProSiteProfiles Protein kinase domain profile. 289 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03230 660 MobiDBLite consensus disorder prediction 186 200 - -
Aip05g03230 660 MobiDBLite consensus disorder prediction 29 83 - -
Aip05g03230 660 MobiDBLite consensus disorder prediction 21 147 - -
Aip05g03230 660 MobiDBLite consensus disorder prediction 115 147 - -
Aip05g03230 660 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Aip05g03230 660 Gene3D Phosphorylase Kinase; domain 1 269 364 - -
Aip05g03230 660 MobiDBLite consensus disorder prediction 179 269 - -
Aip05g03230 660 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 56 644 - -
Aip05g03230 660 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 56 644 - -
Aip05g03230 660 Pfam Protein tyrosine and serine/threonine kinase 294 562 IPR001245 GO:0004672|GO:0006468
Aip05g03230 660 MobiDBLite consensus disorder prediction 613 660 - -
Aip05g03230 660 MobiDBLite consensus disorder prediction 613 640 - -
Aip05g03230 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Aip05g03230 660 MobiDBLite consensus disorder prediction 218 246 - -
Aip05g03230 660 Gene3D Transferase(Phosphotransferase) domain 1 365 573 - -
Aip05g03230 660 SMART serkin_6 289 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03230 660 MobiDBLite consensus disorder prediction 91 108 - -
Aip05g03230 660 SUPERFAMILY Protein kinase-like (PK-like) 266 562 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03230 Aip-Chr5 137212014 137218482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03230 113 643 Trihelix Transcription Factor Family AT1G70460 50.749 6.79e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip05g03230 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03230 - - gmx:100781944 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03230 05 137212014 137218482 Aip05g03230 05 137212014 137218482 ECH