Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03221 ATGTCAGCTCCACTACCACTAACCCTTTTTCTCTTCTGCATTATCATCTTCTTCTTCCATTGCTGCATGTGCAATGACTCATCATCAACAACAACCCTTCAAACCCTTAAGCCCATCCTCCCAAACAAAAGCCCAGGCCCAGGCCCATCTCATCCATCAACAGCAACCATCCCTGCATTCCCTGAACAATCTGATGTCAAAGGTTGCCCCTTGACACTCTCAGATGAACTCTTTGACGGTATAAAGAATGCTTGTGGAGGCGGTGGTGGTGGTGGTTCTGACATGGAGCTCCACCGCACACGGTGCTGCCCTGTTCTTGCATCATGGTTATACTCTGCATATTCTTCCACGGCATTAACCCATAGCCATACCCACACATCATCATTGTCATATGAGATGCCATTGTTACCAGATGACTCAGAAACATGTGTGAATGACTTAGAGAATGCACTGAAAGTGAGAGGGATTCAGCTGAAAAGACCTAATGAGACATGTGATGTTGTATTCTGCTTCTGTGGGATAAGGCTTCACCCTCTGAGTTGCCCAGATGCATTTTCAGTTAATAAAAATGGTGAATTTGTTGGGGATAAAACTGTGAGAAGGTTAGAGAAGAATTGCATCAGTAGAACCAACAATGTCAATGGCTTCCCTGGTCTTGGTGGCTGCTCCAAGTGCTTGAACACACTCTACAGGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGAAAACCGGATGAATGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTAATGTGAAAAGCATTAATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCAGTCAGAAGGAAGAGGAGAAGCTATGAATCAAAAGCATAACATTCCCAAAATCAACGGTGATATAAGCAACTCCAATGAAAACAATAATAACCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAGTTATCTGAAGTAAAGAAAGAAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGCAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTAGGAGGTGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCCTCGCTCATCATGGACGATCGCACAAGCAGCGGCCATGACTTCCACCTTGCGATTGGATGA 1440 0.4347 MSAPLPLTLFLFCIIIFFFHCCMCNDSSSTTTLQTLKPILPNKSPGPGPSHPSTATIPAFPEQSDVKGCPLTLSDELFDGIKNACGGGGGGGSDMELHRTRCCPVLASWLYSAYSSTALTHSHTHTSSLSYEMPLLPDDSETCVNDLENALKVRGIQLKRPNETCDVVFCFCGIRLHPLSCPDAFSVNKNGEFVGDKTVRRLEKNCISRTNNVNGFPGLGGCSKCLNTLYRGCKEMRASGLLLKFLEAILKAENRMNAGTSRGNAQGFNLSALRKLPNVKSINGKTSLLHFIVEQVAQSEGRGEAMNQKHNIPKINGDISNSNENNNNLVQHETEKEYLMLGLQVLLGGIKDELSEVKKEAIIDHQNFIRMLYILNARVSEIREIVTKCCGENNERGGFVKEMKGFAEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDLVHEEPPSLIMDDRTSSGHDFHLAIG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03221 479 SMART it6_source 47 473 IPR015425 -
Aip05g03221 479 PANTHER FORMIN-RELATED 225 455 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip05g03221 479 Pfam SPARK 67 231 IPR043891 -
Aip05g03221 479 PANTHER FORMIN-LIKE PROTEIN 225 455 - -
Aip05g03221 479 SUPERFAMILY Formin homology 2 domain (FH2 domain) 223 455 - -
Aip05g03221 479 Coils Coil 400 420 - -
Aip05g03221 479 Pfam Formin Homology 2 Domain 224 455 IPR015425 -
Aip05g03221 479 Gene3D Formin, FH2 domain 219 457 IPR042201 -
Aip05g03221 479 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03221 Aip-Chr5 136882290 136884048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03221 214 455 FH2 protein (formin) Gene Family AT1G70140 48.178 1.15e-62 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03221 - - aip:107640085 547.74