Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03211 ATGGCAAATCTCAGCAATGGCAATGATGATAGCAATAATAATGGTTCTTTTCTCAAGATTCCAAAGATAAAGTTTACAAAGCTCTTCATCAATGGAGAATTCGTGGATTCAGTTTCAGGAAAAAGGTTTGAGACAGTAGATCCAAGAACAGAAGAAGTGATTACAGAAATAGCAGAGGCTACAAAAGAAGATATTGATATTGCTGTGAAGGCAGCACGTCAAGCTTTTGATTCTGGTCCATGGCCACGCATGCCTGGTGCTGAGAGAGCAAAGATTATGCTAAAATGGGCAGAGCTAATTGAAGAGAACATTGAAGAGATAGCAGCATTGGACACGATTGATGGAGGGAAGCTATATAGTTGGTGTAAGGCTGTGGATGTTCCGGAAGCATCAAATTTACTGCGTTACTATGCTGGTGCTGCTGATAAAATCCATGGAGAAGTGTTCAAAACTTCTAGGAACCTTCATTTGTATTCTCTTATGGAACCTGTTGGTGTTGTGGGACACATTATCCCTTGGAATTTTCCTACTGTCATGTTCTTCACCAAGGCTAGCCCTGCCTTAGCCGCCGGCTGCACCATGATCCTCAAGCCGGCCGAGCATACGCCTCTCTCGGCTCTCTTTTATGCTCATCTTGCTAAGCTGGCTGGTATCCCAGATGGGGTGCTGAATGTTGTACCTGGATTTGGTTCTACTGCTGGAGCTGCAATAGCCTCACATATGGACGTGGATGCGGTCAGTTTTACTGGTTCGACGGAGACTGGCCGGAAGGTAATGATGGCGGCAACCATGAGCAATTTGAAACCAGTTTCACTTGAATTAGGTGGCAAGTCCCCAGTCTTGATCTTTGATGATGCTGATGTTGACAAAGCTGTTGACCTTGCTCTCTTTGGTATCCTACACAACAAGGGAGAAATATGTGTTGCATTTTCGAGAGTTTATGTTCAAGAAGGAATTTATGATGAATTTGAGAAGAAGGTTGTGGAGAAGGCAAAAACATGGGTAGTAGGGGATCCATTTGACCCTAAAGTTCAACAAGGACCACAGACTAGTAAGGCACAATTTGAGAAAATTCTGTCCTATATTGAGCTTGGAAAGAAAGAAGGAGCTACCCTTTTAAGTGGGGGAAAAAGATTTGGAAACAAGGGCTACTATATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTAATATTACAAGATGAGATATTTGGACCTGTCATGGTGCTTTCTAAGTTCAAGAGCATTGAGGAAGGAATTGAGAAGGCGAATAGCAGCAAATATGGGCTAGCGTCGGGGATTGTGACGAAGAACATGGATATTGCAAACACAGTGTCAAGGTCCATCCGAGCAGGCATTGTTTGGATCAACTGCTTCTTTGCCTTTGATGTTGATTGCCCTTTTGGAGGCTGCAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTCCATAAGTACCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1521 0.4293 MANLSNGNDDSNNNGSFLKIPKIKFTKLFINGEFVDSVSGKRFETVDPRTEEVITEIAEATKEDIDIAVKAARQAFDSGPWPRMPGAERAKIMLKWAELIEENIEEIAALDTIDGGKLYSWCKAVDVPEASNLLRYYAGAADKIHGEVFKTSRNLHLYSLMEPVGVVGHIIPWNFPTVMFFTKASPALAAGCTMILKPAEHTPLSALFYAHLAKLAGIPDGVLNVVPGFGSTAGAAIASHMDVDAVSFTGSTETGRKVMMAATMSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVYVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFEKILSYIELGKKEGATLLSGGKRFGNKGYYIEPTIFSNVKEDMLILQDEIFGPVMVLSKFKSIEEGIEKANSSKYGLASGIVTKNMDIANTVSRSIRAGIVWINCFFAFDVDCPFGGCKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03211 506 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 13 506 - -
Aip05g03211 506 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 300 311 IPR016160 GO:0016491
Aip05g03211 506 SUPERFAMILY ALDH-like 20 502 IPR016161 GO:0016491
Aip05g03211 506 Pfam Aldehyde dehydrogenase family 34 496 IPR015590 GO:0016491
Aip05g03211 506 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 506 - -
Aip05g03211 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 465 IPR016163 GO:0016620
Aip05g03211 506 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 272 279 IPR029510 GO:0016491
Aip05g03211 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 494 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03211 Aip-Chr5 136682264 136686732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03211 13 506 Aldehyde Dehydrogenase Gene Family AT3G24503 68.081 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03211 K12355 - gmx:100784449 873.618