Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03205 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCTTTTCAAGATCCCACCCATCAAGTTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTGATAGCGAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACTTAGAAGAACTAGCGGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCGTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGTTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTCTCGGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGATGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACAGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTATTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATACGATGAGTTTGAGAAGAAGTTGGTTGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGCAAGAAGGAGCAACCCTATTAACAGGTGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCTAATGTCAAGGAAAACATGCGTATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAG 1244 0.4518 MTALSNGHAANNSSLFKIPPIKFTNLFINGHFVHSLSAGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENLEELAALDAIDAGKLYHLVKVVDIPAVANCLRYYAGAADKIHGEVLKGAREFHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKQEGATLLTGGKRVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03205 414 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 414 IPR016163 GO:0016620
Aip05g03205 414 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 414 - -
Aip05g03205 414 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 414 - -
Aip05g03205 414 SUPERFAMILY ALDH-like 17 414 IPR016161 GO:0016491
Aip05g03205 414 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 274 IPR016162 GO:0016491
Aip05g03205 414 Pfam Aldehyde dehydrogenase family 39 414 IPR015590 GO:0016491
Aip05g03205 414 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Aip05g03205 414 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03205 Aip-Chr5 136541563 136556662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03205 4 414 Aldehyde Dehydrogenase Gene Family AT3G24503 72.816 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03205 K12355 - gmx:100783920 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02306 03 35916628 35930952 Aip05g03205 05 136541563 136556662 PCT