Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03202 ATGGTAACAATATTAGGTACTCATACAGTGATCCCAAAAGAAGAGACCCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTTTGGCGATGGAGTCATACACCTTCAATCTACCTTTACAACCCAAAACAGAACAACGCCAAGAACAACAACAATACTGTCGTCGATGTCAATGTCCTCGTTGAGCGAATGCGAGATTCTCTCAGCGAGATTCTCGTTCACTACTATCCATTAGCCGGGAGGCTGAGTTGGACGGACGGTGGCCGTTTGGAACTCGATTGCAACGCAAAGGGGGTATTGCTTCTCGAAGCTGAATCGAAGAAATCAATGGCGGAATATGGAGACTTCACTCCAAATGAACCCAGCATCAAAGAACTCATCCCAGCTGTTGACTACTCTCGTCAAATAAACGAGCTTCCTTTGTTCTTGGCACAGGTGACAAAGTTCTACGGCGGCGATGGCGGCTTTGCAGTCGGAATCCTTTTCTCTCATGCAATAGGCGACGGCCCCGCCGCCATTGGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGTGCGAAGCTAGATCCAAGCGAGCTTCCGTTTCTCGACCGAACCGTGCTCAAACCAACTGAGCCATTAACTCCACCCCTGTTCGACCACCGGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAGCATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGCGGTTAAAACTCACACCAGAACACGTCCAGAAGCTCAAAATGAATGCGAATGCAAATGCAAATGTAACCGTAAATGGAAACGGTAACGGTAACGCTCCTCATAACCCATCTCCGAGACCGTACAGCAGATTCGAAATTATCAGCGCACATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTCGTTAGATTCAACGTCGATATTCGCAACAGATTGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACGCCAACTTGCTACGCTAAAGAAATCACCACTCAACCAATCAGTTACGCAGCGCAGAAAATAAGGGAAGCTGTTAATAAAGTGTCGAATCACGAGTTTGTTAAATCACAAATGCATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGGACACATTATTCGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAACATTATACTTGGCAGTTGGATGAGCATGCCGTTTTATGAGGCTGATTTTGGGTTGGGGAAGCCGTTTTATTTTGGTCCTTGTGGTCTGTGTCCTTATGATAGAGGGATGATTGCTCTAATGCCTGACGAAGATGGTGATAATGGATATGGTGTTGTGGTGTACATGCACTTTCAGGTAGACCACATGAAAGATTTCATCAAATACTTTTGGGAAGATATTTGA 1449 0.4665 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYLYNPKQNNAKNNNNTVVDVNVLVERMRDSLSEILVHYYPLAGRLSWTDGGRLELDCNAKGVLLLEAESKKSMAEYGDFTPNEPSIKELIPAVDYSRQINELPLFLAQVTKFYGGDGGFAVGILFSHAIGDGPAAIGFINSWAKLTRGAKLDPSELPFLDRTVLKPTEPLTPPLFDHREFKPLPLILGRTDSIEEQKKKTTFARLKLTPEHVQKLKMNANANANVTVNGNGNGNAPHNPSPRPYSRFEIISAHIWRCACKARNLEENQPTVVRFNVDIRNRLNPPLPQNYFGNALGPTVTPTCYAKEITTQPISYAAQKIREAVNKVSNHEFVKSQMHYVAGFENRWDLIRTHYSEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPCGLCPYDRGMIALMPDEDGDNGYGVVVYMHFQVDHMKDFIKYFWEDI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03202 482 Pfam Transferase family 1 476 - -
Aip05g03202 482 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 482 - -
Aip05g03202 482 Gene3D - 1 220 IPR023213 -
Aip05g03202 482 Gene3D - 227 481 IPR023213 -
Aip05g03202 482 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03202 Aip-Chr5 136426823 136428802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03202 2 480 Monolignol Biosynthesis Gene Families AT5G48930 33.820 1.43e-80 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03202 K13065 - gmx:100779814 488.804