Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03198 ATGTCTATTGATATCTCCGATGGCCACGTCAAGATTCCCACCACCGTGAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTCGATTCCCTTTCAGGGAGTGAGTTTGAGACAATAGATCCAAGAACAGGAGAGGTAATTGCGAGAATCTCGGAAGGAAGAAAAGAAGATATTGATGCTGCCGTCGAAGCGGCGCGTGAAGCATTTGACACCGGTCCATGGCCTCGCATGCCCGGAGCTGAGAGGGCCAAAATCATGCTGAAATGGGCAGATCTGATTGATCAAAACGCATCAGAGTTAGCAGCATTGGATGCCATTGATGCTGGAAAGTTGTACAATAGGTGCAAGGCCCATGAAATTCCTGCAGCAGCAAATATGCTGCGCTACTATGCCGGTGCTGCCGATAAGATCCATGGTGAGGTGCTAAAAGCATCTGGAGAGTTCCATGCATATACTTTGATGGAACCGGTTGGTGTTGTTGGACACATCATTCCATGGAATTTTCCTAGTAATATGTTTTTCATTAAGGTTAGTCCAGCATTGGCTGCTGGTTGCACCATGGTACTTAAACCTGCCGAACAAACACCGCTGTCGGCTTTGTTTTATGCTCATTTAGCTAAGCAGGCTGGAATTCCAGATGGTGTGCTCAATGTAGTACCAGGATTTGGACCCACTGCTGGTGCCGCAATATCCTCACACATGAATGTTGATAAGGTTAGCTTCACCGGTTCGACAGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATTTTTGATGATGCTGATGTGGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGATATATGATGAATTTGAGAAGAAGTTGGTAGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGACCCTAAATCTCAGCAAGGCCCTCAGATTGATAAAAAGCAATTTGAAAAAATTCTTTCCTACATAGAGCATGGAAAGAAAGAAGGAGCCACCCTTTTATGTGGGGGTAAAAGATTAGGAGACAAGGGCTACTACATTGAGCCAACAATTTTCTCTAATGTTAAGGGGGACATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGTCACTAATGAAATTCAAGTAA 1230 0.4415 MSIDISDGHVKIPTTVKFTKLFINGQFVDSLSGSEFETIDPRTGEVIARISEGRKEDIDAAVEAAREAFDTGPWPRMPGAERAKIMLKWADLIDQNASELAALDAIDAGKLYNRCKAHEIPAAANMLRYYAGAADKIHGEVLKASGEFHAYTLMEPVGVVGHIIPWNFPSNMFFIKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMNVDKVSFTGSTEVGREIMHAAASSNLKQVSLELGGKSPLLIFDDADVDKAASLALLGIVYNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQIDKKQFEKILSYIEHGKKEGATLLCGGKRLGDKGYYIEPTIFSNVKGDMLIAQDEIFGPVMSLMKFK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03198 409 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Aip05g03198 409 Pfam Aldehyde dehydrogenase family 28 409 IPR015590 GO:0016491
Aip05g03198 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 409 IPR016163 GO:0016620
Aip05g03198 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 268 IPR016162 GO:0016491
Aip05g03198 409 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Aip05g03198 409 SUPERFAMILY ALDH-like 13 409 IPR016161 GO:0016491
Aip05g03198 409 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 11 409 - -
Aip05g03198 409 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03198 Aip-Chr5 136350994 136359884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03198 10 409 Aldehyde Dehydrogenase Gene Family AT3G24503 74.314 0.0 608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02307 03 35939180 35951236 Aip05g03198 05 136350994 136359884 PCT