Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03184 ATGAGGAAGAAAGAAGCCATAACCACTCACCATTTCCACCTCATTGCCTTGTTTCTGGGCTCACTCACACTCACCCTCTCCTCCTCCTTCGCCGCCGCAACAAGCACCACAAAGCACGAGTTCAATGGAGCACTCACGGAGGCAGAAACCATGTACATCAAGCAGAGGCAGCTTCTCTACTACAGAGACGAGTACGGAGACAGAGGAGAAGATGTTACAGTGGACCCTACCTTGGTCTTTGAGAACAACCGCATCAGAAACGCATACATAGCCTTACAAGCATGGAAGCAAGCTATTCTCTCTGATCCTCTGAATCTCACCGCTAATTGGGTAGGTCCTAAGGTGTGCGACTACACTGGAGTCTTCTGTGCACCTGCACCTGATGACAACAGGACCCGCACCGTTGCCGGCATTGACCTCAACCATGGCGACATTGCTGGTTACCTGCCTGAGGAGCTTGGCTTGCTCACAGATCTTGCTCTATTCCACATTAACACAAACAGGTTCTGTGGCACACTTCCCCACAAGTTCGACCGTCTCAAGATCCTCTTTGAGTTAGATCTCAGCAACAACCGGTTTGCCGGTAAGTTCCCGGCGGTAGTTCTGCGATTGCCCAAGCTTAAATTTCTAGATCTGAGGTTCAACGAATTTGAAGGCACAGTGCCTTCACAGCTCTTTGATAAAGATCTGGATGCCATTTTCATAAATCATAATCGTTTCGTCTTCGATTTGCCGGATAATTTCGGGAATTCGCCTGTGTCGGTAATAGTTTTGGCGAACAACAAGTTCCACGGCTGTGTGCCTTCAAGCATCGGGAACATGTCAAGGCTGAACGAGATTATTCTGATGAATAACGGTTTCCGTTCTTGTTTTCCGGCAGAGGTAGGGTTGTTGAAGAATCTAACTGTGTTTGATGTGAGCTTCAATCAGCTGGTGGGGCCTTTGCCGGACGCAATTGGTGGAGCGGTGAGCTTGGAGCAGCTTAATGTGGCACACAACTTGCTCTCTGGTGTAATTCCGGCCAGTATTTGTTCTCTGCCAAATTTGGAGAACTTTACATATTCTTATAATTTCTTCACGGGTGAGCCACCGAGGTGTTTGGCTCTGCCGGCCTTTGATGATAGGAAGAACTGCTTGCCTGCTAGGCCACTGCAGCGCTCTGCCGCCCAATGCAGGGCCACGCCTTCAGTGAATTGTGGCTCTTTCAGGTGTAAGCCTTTTGTTCCGTCAATTCCTTCTCCGCCTGTTGCTCTTCCTCCTCCGGTATTATCGCCTCCACCTCCCCCGCCGTCACCACCTCCACCAGTGTATTCTCCACGGCCCCCATCGCCGCCTCCCCCAGTGTACTCTCCCCCTCCGCCACCACCGTCTCCCCCGCCTCCTTCTCCGCCACCTCCTCCTCCACCAGTTTACTCTCCACCGCCCCCGCCGCCCTCACCACCTCCACCGTCCCCTCCACCGCCGTCTCCGCCTCCCCCCGTGTATTCCCCACCTCCACCGCCGCCTTCACCGCCGCCACCTTCCCCGCCTCCTCCGTCACCTCCACCACCTTCGCCATCTCCGCCACCGCCGTCTCCTCCACCACCCTCACCTCCACCTCCGTCGCCGCCGCCACCAGTAGTGTACCCGCCTCCACCCTCACCACCACCACCGCCAGTGTACTCTCCACCACCACCTGTTTACTACTATAACTCCCCACCACCACCTCATTCGCCACCGCCACCACATTCGCCACCACCTCCACCACCTCACCACTCACCCCCGCCACCACCTCATTCACCACCACCACCATCACCGCCCCCACCATGTATAGAGCCACCACCACCTCCTCCACTATGTATAGAACCACCCCCACCACCTCCTCCGCCTCCCCCTTCGCCACCACCATGCGAAGAGCATCCACCACCACAACCATCACCACACCCTGCACCTTACCATCCACCACCATCGCCACAGCCTGCACCTTACCATCCACCGCCATCACCATCACCGCCACCAGCACCTGTATATGAAGGGCCCTTGCCACCTGTTATCGGAGTCTCGTATGCATCACCACCACCACCACCTTATTATTGA 2076 0.552 MRKKEAITTHHFHLIALFLGSLTLTLSSSFAAATSTTKHEFNGALTEAETMYIKQRQLLYYRDEYGDRGEDVTVDPTLVFENNRIRNAYIALQAWKQAILSDPLNLTANWVGPKVCDYTGVFCAPAPDDNRTRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINTNRFCGTLPHKFDRLKILFELDLSNNRFAGKFPAVVLRLPKLKFLDLRFNEFEGTVPSQLFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNKFHGCVPSSIGNMSRLNEIILMNNGFRSCFPAEVGLLKNLTVFDVSFNQLVGPLPDAIGGAVSLEQLNVAHNLLSGVIPASICSLPNLENFTYSYNFFTGEPPRCLALPAFDDRKNCLPARPLQRSAAQCRATPSVNCGSFRCKPFVPSIPSPPVALPPPVLSPPPPPPSPPPPVYSPRPPSPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPPPPVVYPPPPSPPPPPVYSPPPPVYYYNSPPPPHSPPPPHSPPPPPPHHSPPPPPHSPPPPSPPPPCIEPPPPPPLCIEPPPPPPPPPPSPPPCEEHPPPQPSPHPAPYHPPPSPQPAPYHPPPSPSPPPAPVYEGPLPPVIGVSYASPPPPPYY 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03184 691 Gene3D Ribonuclease Inhibitor 253 381 IPR032675 -
Aip05g03184 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 469 - -
Aip05g03184 691 MobiDBLite consensus disorder prediction 424 542 - -
Aip05g03184 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 469 - -
Aip05g03184 691 Gene3D Ribonuclease Inhibitor 89 251 IPR032675 -
Aip05g03184 691 PRINTS Proline rich extensin signature 418 434 - -
Aip05g03184 691 PRINTS Proline rich extensin signature 444 456 - -
Aip05g03184 691 PRINTS Proline rich extensin signature 457 478 - -
Aip05g03184 691 MobiDBLite consensus disorder prediction 565 691 - -
Aip05g03184 691 SUPERFAMILY L domain-like 90 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03184 Aip-Chr5 136080119 136083301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03184 45 404 Leucine-rich Repeat extension Gene Families AT3G24480 75.207 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03184 - - gmx:106799218 651.358