Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03179 ATGTGCTTCTTCCTCTCTCCATTGCACAGCTGCTTCTTCTCTCCGTTGCACGAGCTGCTTCCGCCGCTACCGTTGCCGCCGCCGCTTGCATCACACGATCTCTCTCTGTCATCCCTTGCGTCGCACGAGCTTCCTCCGTCGCTGCTCTTGTCGCATCTACTCCCATCATCACAGAGCTCTCTCCGCCGTTGCTCTCATCGCATCTGCTCCTTCTGGCGCCTCTTCCATCTAATCTCAACTCGCTCTCTCAGTTCTTCTCGTACCCATCTCGAATTTCAGGTTTACTCTGATTTTGATGAATTTTTTTCTGCAATCGGAAGCTTTTTTGACCTAAAATTCATGGTTTTTAGGGTTGTTAAATATCAAGTCAAATCTGTAGCACAGCATCTGTTTGAGGAACCGTTGTCTATTGATCATGTCGAGCGAGCGCTGGATAATATTTATAAGGTTTCTGAAGAACACCCCACTAGTAGATATGTTATCAGGAATGCTGACATTGTGCATAGCCAAGGACAAAGAAAGCAGGGTTCTGATGGCGTTAAGATAGAGATGGCCTCTTTAGTAGGAAGGATGACATTGACAAATAGCTGTAAAGAACAAATTGCTAGGGACGACGCTAGAACAAATTGCACCTTGAAATCCCCTTTCTTCTTTGCTTCTTTCTCACTTCTTCTTCTGTTTTCAGATCAAGCTAACTTCAGGATTCATTTGCTGGTGAAGATAATCATGGTCAGCCTTCTAGACAAGATCCATGAGGTCGACAAACAAATCGATAAGCTCTCTGGGCTACTTCAAAAGCTAAAGGAAGCTAATGAAGAATCAAAAGTTGTTACAAAAGCATCTGCTATGAAAGCTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAATATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATGTAATGAGACGAAGATAA 960 0.4313 MCFFLSPLHSCFFSPLHELLPPLPLPPPLASHDLSLSSLASHELPPSLLLSHLLPSSQSSLRRCSHRICSFWRLFHLISTRSLSSSRTHLEFQVYSDFDEFFSAIGSFFDLKFMVFRVVKYQVKSVAQHLFEEPLSIDHVERALDNIYKVSEEHPTSRYVIRNADIVHSQGQRKQGSDGVKIEMASLVGRMTLTNSCKEQIARDDARTNCTLKSPFFFASFSLLLLFSDQANFRIHLLVKIIMVSLLDKIHEVDKQIDKLSGLLQKLKEANEESKVVTKASAMKAIKKRMEKDIDEVGNIAHGVKTKIEAINRDVMRRR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03179 319 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 244 315 - -
Aip05g03179 319 Coils Coil 250 273 - -
Aip05g03179 319 Gene3D - 242 319 - -
Aip05g03179 319 PANTHER SYNTAXIN 244 315 IPR045242 -
Aip05g03179 319 SUPERFAMILY t-snare proteins 245 313 IPR010989 GO:0016020|GO:0016192
Aip05g03179 319 Pfam Syntaxin 246 316 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03179 Aip-Chr5 135946139 135949692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03179 249 319 SNARE and Associated Proteins AT3G03800 52.113 6.46e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03179 K08486 - gmx:100800991 117.472