Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03154 ATGATTGTGAACCAACAGGGACTAAAGAGAACAACAAAGAAAGTAAGCAAGGCCATTGATGAAGCATTGGAGCATATCATCAACGATCATGACCACCCTTCATCAGATGGATCCCCACAACATAACAAGGATTTCATAGACATATTACTTAGCCACATGAATCAAACAATGGACCCAAATGATCATGAAGAAAGACACGTAGTTGGAAGAACTAATATAAAGGCTATTGTAGTGGACTTAATTGCTGGAGCATACGACACTTCTAAAACCGCAATTGAATGGGGTATGTCAGAGCTCTTAAAAAATCCAAGAACATTGAGAAAACTTCAAAACGAAATGGAAGTCCTTGTGGGAATAAATAGACAAGTCGAAGAAAAAGACTTAGAAAAATTGCCTTACCTTGACATGGTTGTGAAGGAGACATTGCGATTATACCCTGTTGGACCATTTCTTGTGCCACGCGAGTCATTAGAAGATGTTACTATACATGGTTATTTTATAGAGAAAAACACACGAATCATGGTGAATGCATGGGCAATAGGGAGAGATCCAAGAGTTTGGTCGGAAAATAGTGACATATTTTTCCCAGAAAGATTTGAGAACAACCATGTAGATGTTAAAGGGCATGATTTTAGACTCATTCCATTTGGGTCAGGTCGTAGAGGGTGTCCTGGGATGAATATGGGTTTAACTACCATTAAGATTGTTATAGCACAATTAGTGCATTGTTTTAGTTGGGAACTTCCATTGGGTATGGCCCCAAAGGATTTAGATATGACCGAAAAATTTGGACTCTCTATACCAAGAAGTAAGCACTTATTAGGTAGGCCAACTTATCGTTTACTTAGTGAAGCTTAA 858 0.3834 MIVNQQGLKRTTKKVSKAIDEALEHIINDHDHPSSDGSPQHNKDFIDILLSHMNQTMDPNDHEERHVVGRTNIKAIVVDLIAGAYDTSKTAIEWGMSELLKNPRTLRKLQNEMEVLVGINRQVEEKDLEKLPYLDMVVKETLRLYPVGPFLVPRESLEDVTIHGYFIEKNTRIMVNAWAIGRDPRVWSENSDIFFPERFENNHVDVKGHDFRLIPFGSGRRGCPGMNMGLTTIKIVIAQLVHCFSWELPLGMAPKDLDMTEKFGLSIPRSKHLLGRPTYRLLSEA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03154 285 SUPERFAMILY Cytochrome P450 7 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS P450 superfamily signature 83 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS P450 superfamily signature 214 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS P450 superfamily signature 223 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 Coils Coil 106 126 - -
Aip05g03154 285 PRINTS E-class P450 group I signature 92 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS E-class P450 group I signature 72 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS E-class P450 group I signature 223 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS E-class P450 group I signature 213 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PRINTS E-class P450 group I signature 176 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 280 - -
Aip05g03154 285 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 216 225 IPR017972 GO:0005506|GO:0016705
Aip05g03154 285 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 280 - -
Aip05g03154 285 Pfam Cytochrome P450 7 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03154 285 Gene3D Cytochrome P450 2 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03154 Aip-Chr5 135415838 135416695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03154 3 283 Monolignol Biosynthesis Gene Families AT4G36220 40.550 2.56e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03154 - - gmx:100782181 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03154 05 135415838 135416695 Aip05g03154 05 135415838 135416695 ECH