Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03138 ATGATACACGATTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGGTTGCAATCGGGTGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCAGGCAAGAATTCGTGCAATATTAGATACAAAAATTCAGAAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCGAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTACCTGAGAGGTAAAGCTGGGTATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTAGAAAATTTGTTATGGGCTGATGGGACTAGCCGTATTGATTATAAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGAAATGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCGTATTTGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAGTAAACACCCTACGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAAAAGCAATTAAACAGGTCTTTCCTTATGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCATGCGAGAAGGTTAAGAACAGTGGATTTCTAAATGACTTCAAGAAATTGATTTATGCCAATGTGAGTGTTGAAGAGTTTCAGGTCATGTGGGAAGACATGGTGGCCAGGTATAACTTATCAAGCAACTCTTGGGTCATCCAAACCTATGAGTTGAGGAATCTACGGGCTCTTGCATATTTGAGGGACCAATTTTTTGGGCGAATCAGGATAACATCCCAGTGTGAAGGGATTAACTCTCTAATAAAAGCATATGTGAGAAAGAAAGATATCCTTCTTGAATTTATCAATAACATGGAGACCGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGAATTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATATAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACAGTTTTGGATTGCCAGATATTGATCATGTCGTTGAGTTTGACAGAGTTGGGGGGATGCTTCGTTGCGAGTGTCTGTGGTTCGAAAATAGCGGAATTCCCTGCATGCACATATTCGCCTGCCTAAAGCACCAACATGTTGAAGTTATTCCAGAACGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCGAAGCAATAAATGTTGTTGTCAACACAATTACAAAACTCCAAAAGCGAGGTGAAAATCCACGCAATGGTAACTTAGACGATGACTACGTTGTTGACCTATTGGTAGTGAAGAGTAAGGAAGCCCCCAAGAAAAACTCAAAATTTAAGCAACAGAGAAGGTGCTCAAACTGCGGTGTGACAGGACACTACAACAAAAGTTGTCCTAATCTTCCTGGTAGAATCCCAAAGGAGACGGTAGATGATGATACAGAAAAGAATATCAGCAGCCATCTTGACATCCTTACTAAGCGCAAAAGACATGATAGTGTGAAAAATCAACAGAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAACACCAACCTCAGCAGCTAAATCGGATTATACTGATCAAGTGAAAACATCAAGTCCTAGTCCCGATATCCCAGTTTGTGCATCTACAAGTAACGAAGAGTCCGGGTTGAGTTCCAAAATAATTTCATGTTGA 2229 0.4154 MIHDFAVRLDEVRRDSDGSVIMRQIGCNRVGSRKEEVEKDERIRDHRPLTRSCCQARIRAILDTKIQKWKVVSFYEEHSHELVAPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVKGGDANAAISYLRGKAGYDSYFFGKYTLSNENRLENLLWADGTSRIDYKCFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVVFGCGLLVNEDIGSYKWLLETFLEAMGSKHPTAVVTDGDLSMRKAIKQVFPYATHRLCAWHLHRNACEKVKNSGFLNDFKKLIYANVSVEEFQVMWEDMVARYNLSSNSWVIQTYELRNLRALAYLRDQFFGRIRITSQCEGINSLIKAYVRKKDILLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLPTLEDFAAKNFTRNMFREVRKEIEGACAMNIELVIQDGGKLYFKCNSFGLPDIDHVVEFDRVGGMLRCECLWFENSGIPCMHIFACLKHQHVEVIPERLVCKRWTKNAKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDVACKNSSDFVEAINVVVNTITKLQKRGENPRNGNLDDDYVVDLLVVKSKEAPKKNSKFKQQRRCSNCGVTGHYNKSCPNLPGRIPKETVDDDTEKNISSHLDILTKRKRHDSVKNQQKMEKDRNIGGGTTPTSAAKSDYTDQVKTSSPSPDIPVCASTSNEESGLSSKIISC 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03138 742 ProSiteProfiles Zinc finger CCHC-type profile. 632 649 IPR001878 GO:0003676|GO:0008270
Aip05g03138 742 PANTHER OS02G0262500 PROTEIN 4 629 - -
Aip05g03138 742 MobiDBLite consensus disorder prediction 675 691 - -
Aip05g03138 742 SUPERFAMILY Retrovirus zinc finger-like domains 622 656 IPR036875 GO:0003676|GO:0008270
Aip05g03138 742 MobiDBLite consensus disorder prediction 692 742 - -
Aip05g03138 742 ProSiteProfiles Zinc finger SWIM-type profile. 480 518 IPR007527 GO:0008270
Aip05g03138 742 Pfam MULE transposase domain 205 299 IPR018289 -
Aip05g03138 742 MobiDBLite consensus disorder prediction 675 742 - -
Aip05g03138 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 629 IPR031052 GO:0006355
Aip05g03138 742 Pfam FAR1 DNA-binding domain 5 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03138 Aip-Chr5 134994350 134996704 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g03138 MULE 1.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03138 - - aip:107641230 1509.97