Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03135 ATGGCAAGGGCAAGAGACAGAACCGAGGATTTCAAAGATGCTGTTCGACACAGTGCACGATCTTTGGGGTATGATGAGGCTAAGTTGGCGTCAGTTATGGCATCTTTCATTATTCATAAACCTCCACAAAGGTCGCCGTTTTCAAAAGCTGCACTGAAGACGCTCGAGAGTATTGGAGAACTAGAAGAATTTTTGTCAAAGCATAGAAAGGACTATATGGATTTGCACCGCACAACTGAAAAGGAGCGAGATAGTATTGAACATGAAGTTAGTGTTTTTGTTAAAACTTGTCAGGAACAAATTGATATTCTCAAAAATAGTATAAATCAAGAAGAGGAAACATCAAAAGGATGGCTTGGCATTACAACGTCAAAGGCTAATGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATCTTAAGTGAGAAACTCCATTCAGTTTCAGCTCAGTTTGATAAGCTTAGAGCTGTTCGTTTCCAAGATGCCATTAATCGAGCAATGCCACGAAGAAAACTTAATCGCCTAACCAAGAAAGATTCTATAGAAACCCCTAAATCAGATGACATGGAGCTCAGAGAACCTAGTGAATTACACAATGAGCCTCTAAGAGTCCAACAACAGCTATTGGATGATGAAACACGCACACTTCAGGTGGAATTGTCCAATCTTCTAGATACAGTTCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCGTATCTACACACGTTTTGCAACAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTAAGAATGTTGAACTTGGCAACAAAGAACTTTCCCAAGCCATTCAGCGGAATAGCAGCAGCAGAACATTTCTTATACTTTTTCTATTTGTGCTTACATTTTCAGGTTGGGATGAAATCAAAATCTCATCCCTAACCAACGTAACAGAGGAGCTGCTAGGGTTCGCGAAGGTGGGTGGAGCCATGGCTGCCGAGAGCTCACGGTCGTCTCAGAGTCGGTCGTCTGCGCAGAAGAGGGAGCTTCTTTGTGGACATGGTGAGAGACCCGTGCTAAAAATTTCGGGAACGAAGAACAACCCTAGACGAGGATTTTGGGGCTGTGTCTACTATGAGATCAAAGAAGAGTGTGAGTTCTTCCGATGGGCAGACCCAGAAGCAGAGAGTGAGAATCCGCAAGTTGCAAGGATGAAGAGGAAAGTTGCGGCCCTGAAAACAAAAGTGAGGGATATTGAGTGGAAGTTCAAGGTTGCTGCAGTGTTGGGACGGTTGGATGAGTTTGTTTATTTTGCTTCTGGTCGCAGATTTGGTTGA 1329 0.4327 MARARDRTEDFKDAVRHSARSLGYDEAKLASVMASFIIHKPPQRSPFSKAALKTLESIGELEEFLSKHRKDYMDLHRTTEKERDSIEHEVSVFVKTCQEQIDILKNSINQEEETSKGWLGITTSKANADTIAHKHGVVLILSEKLHSVSAQFDKLRAVRFQDAINRAMPRRKLNRLTKKDSIETPKSDDMELREPSELHNEPLRVQQQLLDDETRTLQVELSNLLDTVQETETKMVEMSALNHLVSTHVLQQAQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSGWDEIKISSLTNVTEELLGFAKVGGAMAAESSRSSQSRSSAQKRELLCGHGERPVLKISGTKNNPRRGFWGCVYYEIKEECEFFRWADPEAESENPQVARMKRKVAALKTKVRDIEWKFKVAAVLGRLDEFVYFASGRRFG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03135 442 PANTHER SYNTAXIN-18 5 301 - -
Aip05g03135 442 PANTHER SYNTAXIN-18 5 301 - -
Aip05g03135 442 Coils Coil 399 419 - -
Aip05g03135 442 SUPERFAMILY t-snare proteins 56 273 IPR010989 GO:0016020|GO:0016192
Aip05g03135 442 Coils Coil 94 114 - -
Aip05g03135 442 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Aip05g03135 442 Gene3D - 212 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03135 Aip-Chr5 134956180 134961439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03135 67 288 SNARE and Associated Proteins AT1G51740 71.749 5.90e-102 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03135 K08492 - gmx:100778011 520.776