Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03125 ATGAAGCCCCAATCGGAAAACCACTCTACAGAACCCAGGAATCTGGGCCACTCTTCAAGTGCCAACTTCAATGGAATCAATTTTGGTGAAGTTGAAGCCAAGCACCGAATGCTTTTGGTCCAGTGGCTAAATAGTCTTCTTCCAACGTTGAACTTGCCGGTAAATATCACAGATGATGAGCTAAGAGTATGCTTGAACAATGGTACAATTTTATGTCAAATAATGAACAAGCTACGACCTGGTTCAGTAAGTGAGGTCAGTGAATTTGATAATTCTCCGTCAGCAAAGTCAGAGAATGTTAAGAGATTCCTGAAAGCCATAGATGCATTGGGCATGCCCAAGTTTGAAATATCAGACCTAGAGAAGGGCCATATGAAGTCTGTTGTGGATTGTCTTTTAACACTTAGAGCCAAAAGTTTACAGAATGCTTGGGGAGACAATATTTCTATGACTAATTCCAAAGTCAGATCCATCATGAGTTCACCTTCATCACATGGGGGTGATCAGAGGAAGAATCCATCAGAGTCAAAGTTCCAAAGTGTTTTGCGTAGTCCGGTTATGGCTGAGCCATCGGCTGCATTATTACACCATGTAGGTCATAAATTTCATGAGGTGTTTCAAATGAAACACGGAAGCTATGCTGAACTTCCTGCTGCAAAAATCTCAGAACTGATGAAATCTACCAGTTTAAATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAACGCCATTTTGGAAGAAAGTGTTGAAAGAAGAAATAGTGAAATACCCCATCGTGTGGCTGTCTTGTTGAGAAAAGTTGTCCAGGAGATTGAGCGGCGCATATCGACTCAAGCAGATCATTTAAAAACACAAAACAATCTTTTTAAGGCTCGCGAAGAAAAGTATCAATCAAGAATTAGAGTACTTGAGGTTCTTGCTTCTGGAGCAAGGGAAGACAATGAGGTTGGGGTTCGAAGCCCTATTCGGCAACAGCAACAGACTGCAGTTACAAGTGCAATCGTGCAGTCAAAGGAACAGAGTGAGGTGACTAAAATGGAAGAAAAGAAGGCTTTTGAATCAATACAGTCTGAAAAGGCTAAAGAGGAGACAAAGACGGAAGATAACCAAGAGGTAATTCGGTTGATGAAAGAGCTGGAAAATAAAAACACAGACATTTCAAAATTGAAGCAAGAGCTCGAAATAATGAAGAAAGGTAGCCAAGATGTTACTAGCTCTGTGAAAGAGATGGAAGATAAAAACATGGAAATTTCGGCATTGAAGAAAGAGCTAGAAACAATGAAGCAAGGCAACCAAGACCTTACTAAGGTTGTGGAAGAGATGGAAAATAAAAGGGTGGAATTTTCGGCATTGAAACAAGAAGTAGGAACAATGAAGAGTGATGACCAAGATGTTGCTAGGTTGACAAAAGATCTGGAAAGCAAAAAGATCGAAATTGCAACAATGAAGCAAGAACTAGAAGCATTGAGAAAAGGAAATCAAGATGTTGCTGGGCTGATGAAAGATTTGGAAAATAAAAGCACAGAAATTTCAACATTGAAGCAAGAAATAGAAACATTGAAAAAAGGTAACCAAGATGTTGCTAGGCTGATGAATGATCTAGAAAATAAAAAAGCAGAAATTTCAACAAAGAAGCAAGAACTAGAAAACACAATGAAAAATGGTAACCAAGATATTGCTAGGCTGATGAAGGATCTGGAAAATAAAAGCCTGGAGATTTCAGCATTGAAGCAAGAAATAGAAACACTGAAAAAAGATAACCAAGATGTTGCTAGGATGATGAAGGATCTGGAAAATAAAAGCATGGAGATTTCAACATTAAAGCAAGAAATAGAAACATTGAAAAAAGATAACCAAGATGTTACTAGGCTGATGAAGGATCTAGAAAATAAAAACACTGAAATTTCAACAAGGAAGCAAGAACTAGAAGACACATTGAAAAATGGTAACCAAGATATTGCTAAGCTGATGACAGATCTGGAAAATAAAAGAACAGAAATTTCGGCATCGAAGCAAGAAATAGAAACATTGAAAAAAGATAATCAAGATGTTACTAAGCTTGTGAAGGACCTAGAAAATAAAAATACAGAACTTTTAACAAAGAAACGAGAATTAGAAGAAACATTGAAAAATGGTAACCAAGATATTGCTAAGCTGACGAAAGATCTTGAGAATAAAACCATGGAAATTTCAGCATTGAAACAAGAAATAGAAACATTGAAAAAAGATAATCAAGATGTTACTAAGCAGGTGAATGATCTAGAAAAGAAGAATGCAGAACTTTCAACAAAGAAGCAAGAATTAGAAGAGGCATTGAAAAATAGTAACCAAGATATTGCTAGGCTGACGAAAGATCTAGAAACAACGAAGAAAACATATGATTTACAGTGCTCACAGTTGGAAGCAGAAATCAAGGGTGCTAAAGGAGAACTGAAAGAGAAGTCACAAGAATATGAGCATCAGTTGGAATCATTAAGTAATAAGATTAGAGAGAATGAGGCCTCTTATGAGTCTGAATATCAAAAGTGGAACCTAAAAGTTATCCAATTTCAGAAAGCTACAACTTTTCAGCTTAGTTCAATAAAGGTCTTGAAATTGTCTTGGGAAACTGTTAAGCAGCATGTGCTAAATGAGCAACCATTTTATGCAGAAGAGTTTAAGCGATTAGGTGTAAATCTTAAACCATTGGTAGATGCAGCTGAGAACTATCAGGTAGTTCTTGCGGAAAATCGGAAGATGTTCAATGACATTCAAGAATTAAAAGGAAATATTAGAGTATATTGCAGAGTTAGACCATTTCTCCCAGGACAAAAGGAGAAACAATCTATTGTGGAACACTATGGTGAAACCGAGTTGGTTGTGGCAAATCCTTCCAAACAAGGGAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGGTCCAAGTGCAACTCAAGCTGATGTATACAATGACATTCAAGCCTTTATACGATCAGTACTCGACGGGTACAACGTATGCATATTTGCTTATGGCCAAACTGGTTCTGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAGCTGAGAGTGTTGGTGTTAACTATCGAGCTTTGAATGACCTTTTCAGCATAGCGACTACCAGACAGAGCACCATTTCCTATGAAATTGGGGTTCAAGTGATTGAAATATACAATGAACAAGTGCGAGATCTGTTGACGACTGAATCTACTCCAAAAAAGGTTGGGATATTGACTCACTCCCAACCAAATGGCTTAGCAGTACCTGATGCTAGCATGCAACTTGTAAAATCAACCGGGGATGTCATAAAGCTGATGGACATTGGCCTGAAAAATAGAGCCAAAAGTGCAACTTCTATGAACGAAAGAAGTAGCCGTTCTCACAGTGTGGTATCGATTAATGTTCGTGGAGTAGACATGAAGTCTGGTTCTACTCTTCAAGGCAACCTTCATTTGGTTGATTTGGCTGGAAGCGAGAGGGTAGATCGGTCTGAAGTGACTGGTGATCGACTTAAGGAAGCACAGCATATCAACAAATCACTATCTGCCCTTGGAGATGTCATCTTTGCTCTTGCTCAAAAGAATGCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAATCTTCCCTTGGTGGTCATGCAAAGACACTCATGTTGGTACAAATCAATTCAGACGTAAAGTCATATTCCGAATCTCTAAGTACTTTGAAGTTTGCTGAGAGAGTTTCTGGTATTGAGTTAGGAGCTGCGAAAAGTACCAAAGATGGGAAAGATGTCAGAGAATTAATGGAGCAGGTGGCTTCTCTAAGGGACACTATTTTGTCAAAAGATGAGGAGATTGAGAGGCTGCAATTACTTAAAGATCTGAAATCTGACAAGCCTACCCCAGAATAG 3912 0.3834 MKPQSENHSTEPRNLGHSSSANFNGINFGEVEAKHRMLLVQWLNSLLPTLNLPVNITDDELRVCLNNGTILCQIMNKLRPGSVSEVSEFDNSPSAKSENVKRFLKAIDALGMPKFEISDLEKGHMKSVVDCLLTLRAKSLQNAWGDNISMTNSKVRSIMSSPSSHGGDQRKNPSESKFQSVLRSPVMAEPSAALLHHVGHKFHEVFQMKHGSYAELPAAKISELMKSTSLNNAPTQSLLSVVNAILEESVERRNSEIPHRVAVLLRKVVQEIERRISTQADHLKTQNNLFKAREEKYQSRIRVLEVLASGAREDNEVGVRSPIRQQQQTAVTSAIVQSKEQSEVTKMEEKKAFESIQSEKAKEETKTEDNQEVIRLMKELENKNTDISKLKQELEIMKKGSQDVTSSVKEMEDKNMEISALKKELETMKQGNQDLTKVVEEMENKRVEFSALKQEVGTMKSDDQDVARLTKDLESKKIEIATMKQELEALRKGNQDVAGLMKDLENKSTEISTLKQEIETLKKGNQDVARLMNDLENKKAEISTKKQELENTMKNGNQDIARLMKDLENKSLEISALKQEIETLKKDNQDVARMMKDLENKSMEISTLKQEIETLKKDNQDVTRLMKDLENKNTEISTRKQELEDTLKNGNQDIAKLMTDLENKRTEISASKQEIETLKKDNQDVTKLVKDLENKNTELLTKKRELEETLKNGNQDIAKLTKDLENKTMEISALKQEIETLKKDNQDVTKQVNDLEKKNAELSTKKQELEEALKNSNQDIARLTKDLETTKKTYDLQCSQLEAEIKGAKGELKEKSQEYEHQLESLSNKIRENEASYESEYQKWNLKVIQFQKATTFQLSSIKVLKLSWETVKQHVLNEQPFYAEEFKRLGVNLKPLVDAAENYQVVLAENRKMFNDIQELKGNIRVYCRVRPFLPGQKEKQSIVEHYGETELVVANPSKQGKEALRTFKFNKVFGPSATQADVYNDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATAESVGVNYRALNDLFSIATTRQSTISYEIGVQVIEIYNEQVRDLLTTESTPKKVGILTHSQPNGLAVPDASMQLVKSTGDVIKLMDIGLKNRAKSATSMNERSSRSHSVVSINVRGVDMKSGSTLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKNAHVPYRNSKLTQLLQSSLGGHAKTLMLVQINSDVKSYSESLSTLKFAERVSGIELGAAKSTKDGKDVRELMEQVASLRDTILSKDEEIERLQLLKDLKSDKPTPE 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03125 1303 SMART ch_5 35 138 IPR001715 GO:0005515
Aip05g03125 1303 Gene3D - 652 847 - -
Aip05g03125 1303 Gene3D - 28 140 IPR036872 -
Aip05g03125 1303 PANTHER KINESIN-LIKE PROTEIN KLP-3 777 1293 - -
Aip05g03125 1303 ProSiteProfiles Kinesin motor domain profile. 924 1251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 3 565 - -
Aip05g03125 1303 Coils Coil 1265 1285 - -
Aip05g03125 1303 Pfam Calponin homology (CH) domain 36 136 IPR001715 GO:0005515
Aip05g03125 1303 CDD CH 39 140 IPR001715 GO:0005515
Aip05g03125 1303 MobiDBLite consensus disorder prediction 155 181 - -
Aip05g03125 1303 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 565 - -
Aip05g03125 1303 Coils Coil 466 836 - -
Aip05g03125 1303 Gene3D Kinesin motor domain 868 1253 IPR036961 -
Aip05g03125 1303 PRINTS Kinesin heavy chain signature 998 1019 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 PRINTS Kinesin heavy chain signature 1121 1138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 PRINTS Kinesin heavy chain signature 1152 1170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 PRINTS Kinesin heavy chain signature 1201 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 777 1293 - -
Aip05g03125 1303 Gene3D - 554 588 - -
Aip05g03125 1303 Gene3D - 589 619 - -
Aip05g03125 1303 Gene3D - 493 525 - -
Aip05g03125 1303 Gene3D - 368 401 - -
Aip05g03125 1303 Gene3D - 402 433 - -
Aip05g03125 1303 Gene3D - 620 651 - -
Aip05g03125 1303 ProSiteProfiles Calponin homology (CH) domain profile. 33 140 IPR001715 GO:0005515
Aip05g03125 1303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 1289 IPR027417 -
Aip05g03125 1303 SMART kinesin_4 922 1259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 Coils Coil 408 455 - -
Aip05g03125 1303 Coils Coil 363 400 - -
Aip05g03125 1303 MobiDBLite consensus disorder prediction 155 182 - -
Aip05g03125 1303 Pfam Kinesin motor domain 930 1250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03125 1303 SUPERFAMILY Calponin-homology domain, CH-domain 34 136 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03125 Aip-Chr5 134749792 134758589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03125 912 1251 Calmodulin-binding Proteins AT5G65930 39.535 1.91e-67 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03125 K10406 - ini:109159585 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03125 05 134749792 134758589 Aip05g03125 05 134749792 134758589 ECH
Aip03g02349 03 37171009 37175722 Aip05g03125 05 134749792 134758589 PCT