Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03119 ATGGAAGAGAATCTACCTCCTGGATTCAGATTCCACCCAACAGATGAAGAGCTTATAACATATTATCTTACAAGAAAAGTCTCTGAAAATGGATTCACTTCTAAAGCTATTGCTGTTGTTGATCTCAACAAGTCTGAGCCTTGGGATCTTCCAGGTAAGGCAAGCATGGGTGAGAAGGAATGGTACTTCTTCAGTTTAAGAGATAGAAAGTATCCAACAGGACTAAGAACAAATAGGGCAACAGAATCAGGGTATTGGAAGACCACAGGCAAAGACAAAGAGATATTTCGTGGTGGGGTTTTGGTTGGAATGAAGAAAACCCTAGTCTTCTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTTGAGAACAAGAATCCCTTTAGAACTAAGGATGAATGGGTAGTGTGCAGGGTATTCCAAAAGAGCACAGCAGCGAAAAAACCGCCGCAACAAACATCATCCTCCCAACCTGAATCCCCATGTGATGACACAACCTCTTTGGTCAATGAATTTGGTGATGTTATTGAGTTTCCAAATCTAAACACCAACATTAATAATACCAATAATAATAATAATAATTCTTCATCATCATCCTCAAGTGCATTATTCCCTAACAACATTCTTATTTCAGGACAACACATTCATCATCACCATGACCTAACCAATAATAACAATAATAACAATGTTAACACAAACATGAACTTAGCAATGAATTGGCCACCATCAAGTGATCATAATGTTCCATGGCCTTCAGTAGGGTTGTTGAATCCAAGTATTTCATCAATGAATTCCTTGATTCTCAAGGCATTGCAGCTTAGGAATAATTATCAACAAAGAGAAGTTGCATCCACATTTGCACCATCATCATATATTATGCCTCATCATCAAGGAGTAGTAGTTCCTCATCAACAAGTTATTATTGGAACCAATAATGATGACCTAATAACAACTTCTTCAAATCTCATCAATGCTTCTTCTTCTTCTTCATCAAAAGTTTTGGAATGTATGCCACATCAGCAACAACAACAACAGGAGCAACCATTCAATTTGGACTCCCTTTGGTAA 1092 0.3791 MEENLPPGFRFHPTDEELITYYLTRKVSENGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFRTKDEWVVCRVFQKSTAAKKPPQQTSSSQPESPCDDTTSLVNEFGDVIEFPNLNTNINNTNNNNNNSSSSSSSALFPNNILISGQHIHHHHDLTNNNNNNNVNTNMNLAMNWPPSSDHNVPWPSVGLLNPSISSMNSLILKALQLRNNYQQREVASTFAPSSYIMPHHQGVVVPHQQVIIGTNNDDLITTSSNLINASSSSSSKVLECMPHQQQQQQEQPFNLDSLW 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03119 363 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Aip05g03119 363 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
Aip05g03119 363 MobiDBLite consensus disorder prediction 153 174 - -
Aip05g03119 363 ProSiteProfiles NAC domain profile. 5 150 IPR003441 GO:0003677|GO:0006355
Aip05g03119 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 286 - -
Aip05g03119 363 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Aip05g03119 363 PANTHER BNACNNG63190D PROTEIN 2 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03119 Aip-Chr5 134570171 134573778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03119 1 363 NAC Transcription Factor Family AT3G18400 54.032 1.13e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g03119 NAM 7.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03119 - - aip:107644305 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03119 05 134570171 134573778 Aip05g03119 05 134570171 134573778 ECH