Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03116 ATGTTGTTCTCTTCATGGGAGCAGTTACTCGACCTCCGAATCTTTCTGTTGTTACTGAGTTTCTTCCCAGGAAGTTTGTACAGACTAATTCATCGACCGAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTTGATACTGCCCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACCAAATCATCTTGTTGATAAAAATTGGGTTGTGAAAGTGCCAACTAATTGTCATGATTGA 270 0.4222 MLFSSWEQLLDLRIFLLLLSFFPGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCTPVIVHRDLKSPNHLVDKNWVVKVPTNCHD 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03116 89 PANTHER OS06G0232100 PROTEIN 20 83 - -
Aip05g03116 89 Pfam Protein tyrosine and serine/threonine kinase 23 83 IPR001245 GO:0004672|GO:0006468
Aip05g03116 89 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 83 - -
Aip05g03116 89 Gene3D Transferase(Phosphotransferase) domain 1 10 84 - -
Aip05g03116 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03116 89 SUPERFAMILY Protein kinase-like (PK-like) 14 83 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03116 Aip-Chr5 134489427 134490159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03116 17 83 MAP Kinase Kinase Kinase AT1G73660 83.824 5.10e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g03116 PK_Tyr_Ser-Thr 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03116 - - ahf:112751109 153.68