Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03111 ATGAAAGTCAAAGATGTTTCATTATATATGATTGATGCTGCCAAGGAAAATCCTCACTTAGCTCAAAAACTACATGATGTTTTACTTGAAAGTGGTGTCATTGCTCCTCCAAATTTATTTTCTGAAGTTTATCACGAGTTAGGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAAGTGGACAAGAGACTCAGGTTGACAAAAATCTCGGTCCTACTTTGCCTCACCAAAGAGTTCATCCGAAAGGAAGTTCAAACAGCCAGCCGGAGCACTCTAAGCCTGTTGAAGGTTTAGGAATAAACCTTCTTCTTGATCCGAAGTTAGCAGATGTACAACATACACCATCCCAGGTAACACATGGGAAAAATGTTCCAGTTGCGGCGGCTGCAGCAGCAGCTGCTGCTGTTGTTGCTTCCTCTATGGTAGCTGCTGAAACAAAGTCAAACACTGACTCGAACATTGAGCTTCCAGTAGCTGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGACGGACACATGGATGGCACTGGTTATGAGCCGAAGGGTAGTGGTGATGGTGAGAATATTGTGGTAGGAGCAAATTCAGAAGGTGATAGAATATCTGATAGATCTATAGTAAGCAATGCCAGTACAAAATCTGATTTTACACTTGAAGATGTTGCCGAGTATGACATTCCGGTTGAGGAAATCACATTGGGTGAACGTATCGGACTTGGATCGTATGGGGAGGTATACTGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCACAAGTCAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGATGTCCGAATCTTTCTATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGCGAAGGAGGTTGAGGATGGCCCTTGATATTATAACCACATTTCGACTCAATGGATCAAACTACCTTAGATGGTCTCAATCAGTTCAGATATATATCTGTGAGAGAGGGAAGATTGGATATCTCACCGGTGAGCGAAGCCAGCCTAACATCACTGACCCACAATATAATGTGTGGGATATCGAAAATTTCATGGTGATGACATGGCTGGTGAGCTCAATGGAGGAGGATATCAGTAGTAACTATATGAAGTACACCACTACCAAAGAATTGTGGGATAGAGTCAAAGAGATGTATTCTGATCTTGGAAATAAATCCCAAATTTATGAACTTACTCTAAAAGTTAGAGAAATTCAACAAGGGAGTCACAATGTCACCAAATACTTTCATACGTTGAAGCGGTTGTGA 1434 0.4177 MKVKDVSLYMIDAAKENPHLAQKLHDVLLESGVIAPPNLFSEVYHELGSPTEEKDEHKPESGQETQVDKNLGPTLPHQRVHPKGSSNSQPEHSKPVEGLGINLLLDPKLADVQHTPSQVTHGKNVPVAAAAAAAAAVVASSMVAAETKSNTDSNIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGHMDGTGYEPKGSGDGENIVVGANSEGDRISDRSIVSNASTKSDFTLEDVAEYDIPVEEITLGERIGLGSYGEVYCGEWRGTEVAVKRFLDQDISGESLEEFTSQVQIMKRLRHPNVVLFMGAVTRCPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDIITTFRLNGSNYLRWSQSVQIYICERGKIGYLTGERSQPNITDPQYNVWDIENFMVMTWLVSSMEEDISSNYMKYTTTKELWDRVKEMYSDLGNKSQIYELTLKVREIQQGSHNVTKYFHTLKRL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03111 477 MobiDBLite consensus disorder prediction 48 64 - -
Aip05g03111 477 MobiDBLite consensus disorder prediction 48 96 - -
Aip05g03111 477 ProSitePatterns Protein kinases ATP-binding region signature. 254 275 IPR017441 GO:0005524
Aip05g03111 477 MobiDBLite consensus disorder prediction 181 209 - -
Aip05g03111 477 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 367 - -
Aip05g03111 477 Gene3D Phosphorylase Kinase; domain 1 241 325 - -
Aip05g03111 477 ProSiteProfiles Protein kinase domain profile. 248 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03111 477 Pfam Protein tyrosine and serine/threonine kinase 248 354 IPR001245 GO:0004672|GO:0006468
Aip05g03111 477 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 367 - -
Aip05g03111 477 SUPERFAMILY Protein kinase-like (PK-like) 231 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03111 Aip-Chr5 134463705 134468209 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03111 1 365 MAP Kinase Kinase Kinase AT1G73660 58.886 1.01e-100 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g03111 PK_Tyr_Ser-Thr 6.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03111 - - aip:107641216 630.172